Arvicanthis niloticus (African grass rat): 117715133
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Entry
117715133 CDS
T08817
Symbol
Smyd1
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1 isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00310
Lysine degradation
anu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
117715133 (Smyd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117715133 (Smyd1)
Enzymes [BR:
anu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
117715133 (Smyd1)
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
117715133 (Smyd1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
117715133 (Smyd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
zf-MYND
TPR_12
DUF3369
Motif
Other DBs
NCBI-GeneID:
117715133
NCBI-ProteinID:
XP_034367690
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All DBs
Position
9:complement(11926607..11973207)
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AA seq
490 aa
AA seq
DB search
MTIGNMENVEVFTSEGKGRGLKATKEFWAADVIFAERAYSAVVFDSLINFVCHTCFKRQE
KLHRCGQCKFAHYCDRTCQKDAWLNHKNECAAIKRYGKVPNENIRLAARIMWRVEREGTG
LTEGCLVSVDDLQNHVEHFGEEEQKELRVDVDTFLQYWPPQNQQFSMQYISHIFGVINCN
GFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQMRIELRALG
KISEGEELTVSYIDFLHLSEERRQQLKKQYYFDCSCEHCQKGLKDDLFLAVKEDPKPSQE
VVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIVSEV
LSYLQAFEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAY
AILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREAALNNQPMQVMAEPSNE
PAPALFHKKQ
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgacaataggcaacatggagaatgtggaggtcttcacttccgagggcaaaggcagaggt
ctgaaggccacgaaggaattctgggctgcggatgtcatctttgctgagagggcttattct
gcagtggtttttgacagcctcattaacttcgtgtgccacacctgtttcaagaggcaggag
aagcttcatcgatgcgggcagtgcaagttcgcccactactgcgatcgcacgtgccagaag
gatgcttggctgaaccacaagaacgagtgtgctgccatcaagagatacgggaaggtgccc
aacgagaacatcaggctggcagcccgcatcatgtggcgggtggagagagagggcactggg
ctcacagagggctgcctggtgtcagtggatgacttgcagaaccacgtggagcactttggg
gaggaggagcagaaggaactccgagtagacgtggatacgttcttgcagtactggccacca
cagaaccagcagttcagcatgcagtatatctcacacatctttggcgtgatcaactgcaat
ggtttcactctcagtgaccagagagggctgcaggcagtgggcgtgggcatcttccccaac
ctgggcctggtgaaccatgactgctggccaaactgcactgtcatattcaacaatggcaat
catgaggcagtgaaatccatgtttcacacgcagatgaggattgaactccgggccctgggc
aagatctcagaaggcgaggagctgacggtgtcctacatcgacttcctgcacctcagcgaa
gaacgcaggcagcagctgaagaagcagtactactttgactgctcctgtgagcactgccag
aagggactgaaggatgacctcttcctggcagtgaaggaagaccccaagccctcccaggaa
gtggtgaaggagatgatacaattctcgaaggatactctggaaaaaatagacaaggctcga
tccgagggtttgtatcatgaggttgtgaagctgtgtcgggagtgcctggagaagcaggaa
ccagtgtttgctgacaccaacctgtatgtgcttcggctgctgagcattgtgtcagaggtc
ctctcctacctccaggcctttgaggaagcctcacattatgccaggaggatggtggatggc
tacatgaaactctaccaccataacaatgcccagctgggcatggctgtgatgcgggcaggg
ctgaccaactggcatgctggtcacatcgaagtggggcatgggatgatctgcaaagcctat
gctattctcctggtgacccatggaccctcccaccctatcaccaaagacttagaggccatg
cggatgcagacagagatggaactgcgcatgttccgccaaaatgaattcatgtaccacaag
atgcgcgaggctgccctaaacaaccagcccatgcaggtcatggctgaacccagcaatgaa
ccagccccagctctgttccacaagaagcaatga
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