Arvicanthis niloticus (African grass rat): 117715174
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Entry
117715174 CDS
T08817
Symbol
Bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
117715174 (Bhlhe40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117715174 (Bhlhe40)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
117715174 (Bhlhe40)
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
117715174
NCBI-ProteinID:
XP_034367738
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Position
9:47203852..47210003
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AA seq
411 aa
AA seq
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MERIPSAQPPPTCLPKTPGLEHGDLSGMDFAHMYQVYKSRRGIKRSEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIA
LQSGLQAGDLSGRNIEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLHRVVS
ELLQGGASRKPLDSAPKAMDFKEKPSFLAKGSEGPGKNCVPVIQRTFAPSGGEQSGSDTD
TDSGYGGELEKSDLRSEQPYFKSDHGRRLAVGERVSAIKQESEEPPTKKSRMQLSDEEGH
FAGSDLMGSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNTSAA
ALSSFMNPDKIPTPLLLPQRLPSPLAHSSLDSSALLQALKQIPPLNLETKD
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatccccagcgcgcaaccacctcctacctgcctgcccaaaacgccagggctg
gagcacggagacctgtcagggatggattttgcccacatgtaccaagtgtacaagtccagg
cggggaataaaacggagcgaggacagcaaggaaacttacaaactgccgcaccggctgatt
gagaaaaagagacgtgaccggattaacgagtgcattgcccagctgaaggatctcctacca
gagcatctcaaacttactactttgggtcacttggagaaagcagtggttctggagcttaca
ttaaagcacgtgaaagcattgacaaacctaattgatcagcagcagcagaaaatcattgca
ctgcagagcggtttacaagctggtgatctgtcgggaagaaatatcgaggcagggcaagaa
atgttctgctcaggtttccagacttgtgcccgtgaggtacttcagtacctagccaagcat
gagaacactcgggacctgaaatcttcccagcttgtcactcatctccaccgtgtggtctct
gagctgctgcagggtggtgcttccaggaaaccattggactcagctcccaaagccatggac
ttcaaagagaagcccagcttcctagccaagggatcagaaggccctgggaaaaactgtgtg
ccagtcatccagcggacttttgctccctcgggtggggagcagagcggcagtgacacggac
acagacagtggctacggaggtgaattggagaagagtgacttgcgcagtgagcagccatac
ttcaaaagcgatcacggacgcaggctcgccgtgggagaacgtgtcagcgcaattaagcaa
gagtccgaagaaccccccaccaaaaagagccgaatgcagctctcagatgaggaaggccac
tttgcaggcagtgacctgatgggttccccatttctcgggccgcacccacatcagcctccc
ttttgcttgcccttctatctcatcccaccatcggccactgcctatctgcctatgctggag
aaatgctggtaccccacttctgtgccggtgttatacccaggcctcaacacctcagcagca
gccctctccagcttcatgaacccagacaagatcccaactcccttgctcctgccccagaga
ctcccttctcccttggcacattcgtcccttgactcttcggccttgctccaggctctgaag
cagatccctcctttaaacttagaaaccaaagactaa
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