Arvicanthis niloticus (African grass rat): 117715232
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Entry
117715232 CDS
T08817
Symbol
Caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117715232 (Caprin2)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
117715232 (Caprin2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
117715232
NCBI-ProteinID:
XP_034367831
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All DBs
Position
9:complement(85628635..85694553)
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AA seq
1028 aa
AA seq
DB search
MKSAKSQVNLNQQGENQRALSPLQSPLSSAASPSQAYETYIDNGLICLKHKIRNIEKKKL
KLEDYKDRLKNGEQLNPDQLEAVEKYEEVLHNLEFAKELQKTFSALSQDLLKAQKKAQRR
EHMLKLEAEKKKLRTILQIQYVLQNLTQEHVQKDFKGGLNGAMYLPSKELDYLIKFSKLT
CPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHVKDLLSKLLHSGYFESVPVLR
NSKEKSEEMVMQSEKKKQSLKTESIKESESLMELVQPEIQPQEFLNRRYMTEVNFSRKQE
NEEQSWEADYTRKPSLLKCWNTLSEPDGQEKKKESLESWESSLKSQEVSKPVVSLEQGKP
GSTSQAEQKQQVSMAPVSQWKPESPKSKVGSPQEEQTIQATPKSWVVQSQKEQDPKKLPP
ESWAVSVQSDQSGSQSWTTPVCREQASVQPGTPGSWKNKAENQKQSLIPQSQVSLKSWGA
ASAGLLPNDQVQPRKLNVEPKDVPKPMSQPIDSSSAFPKDPVLRKEKLQDLMTQIQGTCN
FMQESVLDFDKPSSAIPSSQPPSASPVSTVSAEQNLSNQSDFPQEPSQTSSPVTCSSNAC
LGTTDQASSGSETEFMTSKTLEMVVPPCKPASALASPNPPLSKGFQLPPASGSSASISTA
PFQAMQTVFNVNAPLPPLKEREMKESPYSSGYNQNFTSSSTQTVSQCQLPSVHIDQTIQP
PETVVGYHPDGTVQVSNGSLAFYPAPTNMFPRPAQPFVSSRGALRGCSHGGRLLMNPYRS
PGGYKGFDSYRGLPSASSGNYSQLQLQAREYPGTPHFQRDNLQQCYKRSGTSSGLQANSR
GWSDSSQVSSPERDSETFNSGDSGLGDSRSMTPVDVPVTNPAAAILPVHIYPLPQQMRVA
FSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVP
LYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLLQGDQIWLRLHRGAIYGSSWKYSTF
SGYLLYQD
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagccaagtcccaagtgaacctcaatcagcaaggggaaaaccagcgggctctg
agccccctgcagtctcctctcagttctgctgcatctccttcccaggcatatgaaacctat
attgataatggacttatatgccttaaacacaaaattaggaacatcgagaagaagaagctc
aaactggaagattataaggatcgcctaaaaaatggagagcagcttaacccagaccagttg
gaagcagtggaaaagtatgaagaagtacttcataatttggaatttgccaaggagcttcag
aaaaccttttctgcactgagccaagatctactgaaagcacagaaaaaggctcagagaagg
gagcacatgcttaaacttgaggctgagaagaaaaagcttcgaactatacttcaaattcag
tatgtattacagaacttgacacaagaacatgtacaaaaagacttcaaagggggcttgaat
ggtgcaatgtatttgccttcaaaagaacttgactacctcattaaattctcaaaactgacc
tgccctgaaagaaatgaaagtctgagtgttgaagaccagatggagcagtcatccttgtac
ttttgggaccttttggaaggtagtgagaaagcagtggtaggaacaacatataaacatgtg
aaagacctgctgtctaaattgctgcactcaggttattttgaaagtgtcccagttctcaga
aattctaaggaaaaatcggaagaaatggtgatgcaatcagaaaagaaaaaacagtcactg
aagactgagtctatcaaagagtcagaatctcttatggaacttgtacagccagagatacag
ccacaggagtttcttaacagacgctatatgacagaagtaaacttttcaagaaaacaagaa
aatgaagaacaatcctgggaagcagattatactaggaaaccaagtctcctcaaatgctgg
aatacactttcagaaccagatggtcaggagaagaagaaagagtctttggagtcctgggag
tcttctcttaagtctcaggaggtatcaaagcctgtggtttccttagaacagggaaagcct
gggtcaacatcgcaggcagagcagaagcagcaggtctctatggcacctgtcagtcagtgg
aagccagaaagccctaagtccaaggtgggcagccctcaagaagagcagactatacaggcg
acaccaaagtcatgggtggttcagtcacagaaggaacaagatccaaagaagctgcctcct
gaatcctgggcagtatctgtccagagtgaccagagtggcagccaatcctggaccactcct
gtgtgcagagaacaggcttcagtgcagcctggaactccaggatcctggaagaacaaggct
gagaaccagaaacaatccttaataccacagtcacaggtttctctgaagtcctggggagca
gcttcagcaggccttttaccaaatgatcaggtccagcccaggaagttaaatgtagaaccc
aaagatgtgcctaagcccatgtctcagcctatagattcttcctctgcctttccaaaggat
ccagtattgaggaaggaaaaactacaggacctcatgacccagattcaaggaacttgtaac
tttatgcaagagtctgttctagattttgataaaccctcaagtgcaattccatcgtcacag
ccgccttcagcttctccagtctctacagtatctgcagaacaaaacttgtccaaccaaagt
gattttcctcaagagccatcacagacttcttctccagttacttgtagctcaaatgcttgc
ttgggcactactgatcaggcttcttcgggatctgaaacagagtttatgacttcaaagacc
cttgagatggtggttcccccctgcaagccagcatctgcacttgcttctccaaatcctccc
ctgtcaaagggcttccagttacctcctgcaagtggtagctcggcctccattagcacagca
ccctttcaggccatgcagacagtgtttaatgttaatgcacctttgcctccactgaaagaa
cgagaaatgaaagaatctccttattcatctggctacaatcaaaattttacttcatcaagt
acacagacagtatcccaatgccagctcccttctgtacacatagaccagacaatccaacct
ccagagactgttgtaggttaccatcctgatggaactgttcaagtaagcaatggcagcctt
gctttttacccagcacccacgaatatgtttcccagacctgctcagccgtttgtcagcagt
cggggtgctttaagaggatgttcacatggagggaggttactaatgaatccctatcggtct
cctggtggctacaaaggttttgatagttacagaggacttccttcagcttcaagtgggaat
tacagccaactgcagctgcaagctagagagtatcctggaacacctcactttcaaagggac
aatttgcagcagtgttataaaagatcagggacatctagtggtcttcaggcaaattcaaga
gggtggagcgactcctcccaggtgagcagcccagagagagacagcgagacttttaacagt
ggagactctgggctaggagactcccggagcatgaccccagtggatgtgccagtgacaaac
ccagcagccgccatcctgccagtacacatctatcccctgcctcagcaaatgcgagttgcc
ttctcagctgccagaacatctaatctggctcctggaactttagaccaacctattgtgttt
gatcttctcctgaacaacttgggagaaacctttgatcttcagcttggtagattcaattgc
ccagtgaatggcacttatgtgttcatttttcacatgttaaaactggctgtgaatgtaccg
ctgtatgtcaacctcatgaaaaatgaggaggtcttggtgtcagcctatgccaatgatggt
gctccagaccatgagacagcaagcaaccatgccattctccagctcctccagggagaccag
atatggttacgcttacacaggggagcgatttatggaagtagctggaaatactctacattt
tcaggctatcttctttatcaagattga
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