Arvicanthis niloticus (African grass rat): 117715269
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Entry
117715269 CDS
T08817
Symbol
Bhlhe41
Name
(RefSeq) class E basic helix-loop-helix protein 41
KO
K03730
class B basic helix-loop-helix protein 3
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
117715269 (Bhlhe41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117715269 (Bhlhe41)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
117715269 (Bhlhe41)
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
DCX2_DCDC1
Oscp1
Motif
Other DBs
NCBI-GeneID:
117715269
NCBI-ProteinID:
XP_034367894
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Position
9:complement(82768546..82772926)
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AA seq
409 aa
AA seq
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MDEGIPHLQERQLLEHRDFIGLDYSSLYMCKPKRSLKRDDTKDTYKLPHRLIEKKRRDRI
NECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKIIALQNGERSL
KSPVQADLDAFHSGFQTCAKEVLQYLARFESWTPREQRCAQLVSHLHAVATQLLTPQVPP
GRGPGRAPCSAGAAAASGPERVARCVPVIQRTQPGTEPEHDTDTDSGYGGEAEQGRAAVK
QEPPGDPSPAPKRPKLEARGALLGPEPALLGSLVALGGGAPFAQPAAPFCLPFYLLSPSA
AAYVQPWLDKSGLDKYLYPAAAAPFPLLYPGIPAAAAAAAAAAFPCLSSVLSPPPEKAGA
AASAPFLAHEVASPGPLRPQHAHSRTHLPRAVNPESSQEDATQPAKDAP
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaggaatccctcatttgcaagagagacagttactggaacatagggattttata
ggactggactattcctctttgtatatgtgtaaacccaaaaggagcttgaagcgagacgac
accaaggacacctacaaattaccgcacagattaatagaaaagaagagacgagaccgaatt
aatgagtgcattgctcagctgaaagatttactgcctgaacatctgaaattgacaacactg
gggcatctggagaaagcagtagtcttggaattaactttaaagcacttaaaagcgctaaca
gccttaacggagcaacagcatcagaagataattgctttacagaatggggagcgctctctg
aaatcgcctgtccaggccgacttggatgcgttccactcggggtttcaaacctgcgccaaa
gaagtcttgcaatacctcgcgcgctttgagagctggacgcccagggagcagcgctgcgca
cagctcgtcagccacctgcacgccgtggccacccagctcctgacgccacaggtgcccccg
ggcaggggccctgggcgcgcgccctgcagcgcgggggctgcggccgcctcgggtcccgag
cgcgtcgcccgctgcgtgccggtcatccagcggactcagcccggcacggagcccgagcac
gacacggacaccgacagcggctacggaggcgaggcggagcagggccgcgccgcggtcaag
caggagccacccggggacccgtcgcctgcgcccaagaggccgaagctggaggcgcgcggc
gcgctcctgggcccggagcccgcgctgctcggctcgctcgtggcgctgggcgggggcgcg
cccttcgcgcagcccgccgcgcccttctgcctgcccttctacctgctgtcgccgtccgcc
gccgcctatgtacagccatggctagacaagagcggcctggacaagtatctgtatcccgcg
gcggccgcacccttcccgctgctgtaccccggcatccccgcggcggccgccgctgccgcc
gccgccgctttcccttgcttgtcgtccgtgctgtcgccacccccggagaaggcaggcgcg
gccgctagtgccccgttcctagcgcacgaggtggcgtccccggggccgctgcgcccccag
cacgcgcatagccgcacccacctgccgcgcgctgtgaacccggagagctctcaggaagat
gccacgcagccggccaaggacgccccctga
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