Arvicanthis niloticus (African grass rat): 117715489
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Entry
117715489 CDS
T08817
Symbol
Clec1b
Name
(RefSeq) C-type lectin domain family 1 member B
KO
K10070
C-type lectin domain family 1 member B
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117715489 (Clec1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
anu04054
]
117715489 (Clec1b)
04515 Cell adhesion molecules [BR:
anu04515
]
117715489 (Clec1b)
04091 Lectins [BR:
anu04091
]
117715489 (Clec1b)
Pattern recognition receptors [BR:
anu04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
117715489 (Clec1b)
Cell adhesion molecules [BR:
anu04515
]
Lectins
Selectins and C-type lectins
117715489 (Clec1b)
Lectins [BR:
anu04091
]
C-Type lectins
NK cell receptors
117715489 (Clec1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lectin_C
UL45
2CompARG
zf-C4
Motif
Other DBs
NCBI-GeneID:
117715489
NCBI-ProteinID:
XP_034368220
LinkDB
All DBs
Position
9:67727996..67739525
Genome browser
AA seq
229 aa
AA seq
DB search
MQDEDGYITLNIKSRKQDLSSAEPTSSWWRVMALILLISSMGLVAGLVALGIMSVAQPKY
PPAEKENLSATLQQLAKKFCQELIRQSEIKTKNIFEHKCSPCATKWRYHGDSCYGFFRRN
LTWEESKQFCTEQNATLVKTASQSTLKYVADRITSIRWIGLSRENPRKDWMWEDSSVLHK
NVTDVSGNTKENMNCAYLHNGKIHPASCNERHSLICERIAGMTRVDQLL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgaagatgggtatatcaccttaaacatcaagtcccggaaacaagatctcagc
tcagctgaacctacctcttcttggtggcgtgtgatggctttaattctgctgatctcatcc
atggggctggttgctggactcgtggctctggggatcatgtcggttgcacagccaaagtac
ccaccggccgagaaggaaaatctctcagccactctacaacaattggccaagaaattctgc
caagagttgattagacaatcagaaattaagacaaagaacatttttgagcacaagtgcagc
ccctgtgccacgaagtggagataccatggagacagttgctacgggttcttcaggcgtaac
ctaacatgggaagagagcaagcagttttgcactgagcagaatgcaactcttgtgaagacc
gccagccagagcaccctgaaatacgtcgcagacaggattacttccatccgttggattgga
ttatcacgtgagaaccctaggaaagactggatgtgggaagatagctcagttcttcacaag
aatgtgactgatgtttctggaaatacaaaagaaaacatgaattgtgcttatcttcataat
ggaaaaatccatccagcttcctgtaatgagagacattctttaatatgtgagagaattgct
ggcatgacaagagtggaccaactgctttag
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