Arvicanthis niloticus (African grass rat): 117715597
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Entry
117715597 CDS
T08817
Symbol
Dctn1
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04814
Motor proteins
anu04962
Vasopressin-regulated water reabsorption
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05022
Pathways of neurodegeneration - multiple diseases
anu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117715597 (Dctn1)
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
117715597 (Dctn1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117715597 (Dctn1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117715597 (Dctn1)
05016 Huntington disease
117715597 (Dctn1)
05022 Pathways of neurodegeneration - multiple diseases
117715597 (Dctn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117715597 (Dctn1)
03036 Chromosome and associated proteins [BR:
anu03036
]
117715597 (Dctn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
anu04812
]
117715597 (Dctn1)
Membrane trafficking [BR:
anu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117715597 (Dctn1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
117715597 (Dctn1)
Cytoskeleton proteins [BR:
anu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
117715597 (Dctn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Filament
Motif
Other DBs
NCBI-GeneID:
117715597
NCBI-ProteinID:
XP_034368375
LinkDB
All DBs
Position
9:22761872..22795233
Genome browser
AA seq
1281 aa
AA seq
DB search
MAQSKRHMYNRTPSGSRMSTEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGV
ILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKVPKRE
GADAAAKTSKLRGLKPKKAPTARKTTTRRPKPTRPASTGVAGPSSSLGPSGSASAGELSS
SEPSTPAQTPLAAPIIPTPALTSPGAAPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRSE
DKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADT
ADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQL
KQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAE
STVDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVGDLEAMNEMNDELQENARE
TELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEA
SVERQQQPPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPG
GDHDCVLVLLLMPRLICKAELIRKQAQEKFDLSENCSERPGLRGAAGEQLSFAAGLVYSL
SLLQATLHRYEHALSQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPL
TKAIKYYQHLYSIHLAEQPEDSTMQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEATDI
ALLLRDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALAFGSQVSDTLLDCRKHLTWVVAV
LQEVAAAAAQLIAPLAENEGLPVAALEELAFKASEQIYGSPSSSPYECLRQSCTILISTM
NKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLK
IKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQTLLRKKEKDFEETMDALQ
ADIDQLEAEKAELKQRLNSQSKRTIEGLRGPPPSGIATLVSGIAGEEQQRGGAPGQAPGA
LPGPGLVKDSPLLLQQISAMRLHISQLQHENSILRGAQMKASLAALPPLHVAKLSLPPHE
GPGGNLVSGALYRKTSQLLEKLNQLSTHTHVVDITRSSPAAKSPSAQLMEQVAQLKSLSD
TIEKLKDEVLKETVTQRPGATVPTDFATFPSSAFLRAKEEQQDDTVYMGKVTFSCAAGLG
QRHRLVLTQEQLHQLHSRLIS
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagcaagaggcacatgtacaatcggacgccgagtggcagcaggatgagcacg
gaggcaagtgcccggcccctgcgggtgggctcccgtgtggaggtgattgggaagggccac
cgtggtactgtggcctatgttggagccacactctttgccactggcaaatgggtgggtgtg
atcctggatgaagcaaaaggcaagaacgatggcaccgttcagggaagaaagtatttcacg
tgtgatgaaggccacggcatctttgtacgccaatcccagatccaagtatttgaagatgga
gcagatactacttccccagagactcctgattcttctgcttcaaaggtccccaagagagag
ggagctgatgcagctgcaaagaccagcaaactgcggggactgaagcctaagaaggcaccg
acagcccgaaagaccacaactcgacggcccaagcctactcgcccagccagtactggggtg
gctgggcccagtagctcccttggcccctctggatcagcatcagccggtgaactgagcagc
agtgagcccagcaccccagctcagacgccgctggcagcacccatcatccccacaccggcc
ctcacctctcctggagcagcacccccacttccttctccctctaaggaagaggaagggctg
agggcccaggtacgggacctggaggagaagctggagactctgcgtctaaaacgctcagaa
gacaaagcaaagctgaaagagctggagaagcacaagatccagctggagcaggtgcaagaa
tggaagagcaaaatgcaggagcagcaggcagacctgcaacggcgcctcaaggaggcgcgg
aaggaagccaaggaggcgctagaggccaaggagcgctacatggaggagatggcggacaca
gccgacgccatcgagatggccactctggacaaggagatggccgaagagcgcgctgagtct
ctgcagcaggaggtggaggcactgaaggaacgtgtcgatgagctcaccacagacctggag
atcctcaaggctgagattgaagagaaaggctctgatggggccgcatcaagctaccagctc
aagcagctagaggagcagaacgcccgcctgaaggatgccctggtgaggatgcgagatctc
tcttcctcggagaagcaggagcatgtgaagctccagaagctcatggaaaagaagaaccag
gagctggaggttgtgaggcagcagcgtgagcgtcttcaggaggagctgagccaggcagag
agcaccgtcgatgagctcaaagagcaggtggatgctgctctgggagccgaggagatggtg
gagatgctgactgaccggaatctgaatctggaggagaaagtgcgggaattacgggagact
gtgggggacttggaagccatgaatgagatgaatgacgagttacaggagaatgcacgtgag
acagagttggagctgcgtgagcagctggacatggcaggcgcccgcgtgagggaggcccag
aagcgagtggaagctgcccaggagacagttgccgactatcagcagaccatcaagaagtac
cgccagttgactgctcacctgcaggatgtcaatcgggagctgacaaaccaacaggaagca
tctgtggagagacagcagcagccaccgccagagacgtttgatttcaaaatcaagtttgct
gagaccaaggcccatgccaaggcaattgagatggagttgagacagatggaggttgcccag
gccaaccggcacatgtccctgctgacagcctttatgcctgacagcttccttcggccgggt
ggagaccatgactgcgtcctggtcctgctgctcatgccccgactcatctgcaaggcagag
ctcatccggaaacaggcccaggagaagtttgacctaagtgagaactgttcagagcggcct
gggctgcgaggagctgctggggagcagctgagttttgctgctgggctggtgtactcactg
agtctgctgcaggccacactgcaccgctatgagcatgccctctctcagtgcagtgtggac
gtgtataagaaagtcggtagcctgtacccagagatgagtgcccacgagcgctccttggac
ttcctcattgagctgctgcacaaggatcagctggatgagactgtcaacgtggagcccctc
accaaggccatcaagtattaccagcatctgtacagcatccacctcgctgaacagcccgag
gattccaccatgcagctggctgaccatatcaagttcacccagagtgccctggactgtatg
agcgtggaggtggggcggctgcgtgccttcttgcagggtgggcaggaggcaacagatatt
gcgcttcttctccgagacctggaaacatcatgcagtgacatccgtcagttctgcaagaag
atccgaaggcgaatgccagggacggacgctcctgggatcccagcagcactggcctttggc
tcacaggtatctgacacactcctcgactgcaggaagcacttgacatgggtggtagctgtt
ctgcaggaggtggcagctgcagctgcccagcttattgcccccttggcagagaacgagggg
ctgcctgtggctgcactggaggagctggctttcaaagcaagcgagcagatctatgggagc
ccctccagcagcccctacgagtgtctacgccagtcatgcaccatcctcatcagcacaatg
aacaagctggccacagccatgcaggaaggcgagtatgatgcagagcggcccccgagcaag
cctcctccggttgaacttcgggctgcagccctgcgtgcagagatcacagatgctgaaggt
ctgggtctgaagcttgaggatcgagagacagtcatcaaggagttaaagaagtcacttaag
atcaagggagaggagctgagtgaggccaacgtgcggctgagcctcctggaaaagaagctg
gacagcgctgccaaggacgcagatgagcggatcgagaaagttcagactcggctggaggag
actcagaccctgctgcggaagaaggagaaagactttgaggagacgatggatgctctccag
gctgacatcgaccagctggaggcagagaaggcagagctcaagcagcgcctgaacagccag
tccaagcgcacaattgaggggctccggggcccccctccgtcaggcattgctaccctggtc
tctggcattgctggtgaggaacaacagcgagggggcgctcctggtcaggctccaggcgcc
ttgccaggcccagggctggtgaaagactcaccgctgctgcttcagcagatctctgctatg
aggttacacatctctcagctccagcatgagaacagcatcctcagaggagcccagatgaag
gcgtccttggcagctctgccccctctgcatgttgcaaagctttccctcccaccccatgag
ggccctgggggtaacctagtgtctggggcactgtatcgcaagaccagccagctactggag
aagctaaaccagctgagcacccacacccacgtggtagacatcactcgaagcagcccagct
gccaagagcccgtcagctcagcttatggaacaagtggctcagctcaaatccctgagtgac
accattgagaagctcaaggatgaggtcctcaaggagacagtaactcagcgtcctggagct
actgtccccaccgactttgccaccttcccttcatctgccttcctcagggccaaggaagag
caacaagatgacacagtctacatgggcaaagtgaccttttcatgtgcggcaggcctagga
cagcgacaccgcctggtgctgacccaggagcagctacaccagcttcacagtcgcctcatc
tcctaa
DBGET
integrated database retrieval system
