Arvicanthis niloticus (African grass rat): 117715967
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Entry
117715967 CDS
T08817
Symbol
Nfasc
Name
(RefSeq) neurofascin isoform X9
KO
K06757
neurofascin
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04514
Cell adhesion molecule (CAM) interaction
anu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117715967 (Nfasc)
04517 IgSF CAM signaling
117715967 (Nfasc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117715967 (Nfasc)
Cell adhesion molecules [BR:
anu04515
]
Immunoglobulin superfamily
L1 family
117715967 (Nfasc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
Ig_5
V-set_CD47
Ig_PDGFR_d4
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
117715967
NCBI-ProteinID:
XP_034368643
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All DBs
Position
10:complement(21706629..21876376)
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AA seq
1343 aa
AA seq
DB search
MRWLAARGAAGDAREVAAPGADIWDCAQGWSRSSWRLIDLCAIWEPGVFLPSAAADGSRA
STGVGKSRPNEAEKLSTVRKAHIERHKASRACGLGSREQGLVLRMARQQAPPWVHVALIF
FLLSLGGAIEIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWT
RNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQV
SKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGD
LYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTSSSQ
MVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSNKAKFENFNKALRITNVSEEDSGEYFC
LASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEP
LQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPR
NQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQ
GIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVS
WLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQDLAKAYLTVLADQATP
TNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWH
DHSKFPGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYRTSGAPPESNPSDVKG
EGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNVTVWGSRYVVGQTPVYVP
YEIRVQAENDFGKGPEPDTVIGYSGEDLPSAPRRFRVRQPNLETINLEWDHPEHPNGILI
GYTLRYVPFNGTKLGKQMVENFSPNQTKFSVQRADPVSRYRFSLSARTQVGSGEAATEES
PAPPNEATPTAAPPTLPPTTVGTTGLVSSTDATALAATSEATTVPIVPTVVPTTVATTIA
TTTTTTAAATTTTTESPPTTTTGTKIHGTAPDEQSIWNVTVLPNSKWANITWKHNFRPGT
DFVVEYIDSNHTKKTVPVKAQAQPIQLTDLFPGMTYTLRVYSRDNEGISSTVITFMTSTA
YTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEE
DGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKD
KEETEGNESSEATSPVNAIYSLA
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgcggtggctggcagcgagaggtgctgcaggggacgcgagggaagtggcagcgccggga
gcggacatctgggactgcgcccagggctggagccggagctcctggaggttgattgactta
tgtgcgatttgggagcctggagttttcttgccttctgccgccgccgacgggagcagagcc
tccactggtgttggaaaaagcaggccgaatgaggcagagaagctgagcactgtccggaaa
gcccacatagagcggcacaaggcatcgagagcctgtgggctgggcagcagggagcagggc
ctggtgctgaggatggccaggcagcaggcgccaccctgggtccatgtagccctcatcttc
ttccttctcagcctcggaggggccattgagattccgatggatccaagcattcagaatgag
ctgacccaacccccaactatcaccaagcagtccgtgaaggaccacatcgtggacccacgt
gataacatcctgattgaatgtgaagctaaaggcaaccctgcccccagttttcactggact
cgcaacagcagattcttcaacattgccaaggacccgagggtgtccatgaggaggaggtct
gggaccttggtgatcgacttccgcagtggtggccgtccggaggaatacgaaggggagtac
cagtgctttgcccgcaacaaatttggcactgcacttagcaaccgcatccgcctgcaggtg
tccaaatctcccctgtggcccaaggaaaacctagaccctgtcgtggttcaagagggtgcc
cccttgacactgcaatgcaaccccccacctggactcccatcccccgtcatcttctggatg
agcagctccatggagcccatcacccaggacaagcgtgtctcccagggtcataatggggac
ctatacttctccaacgtcatgctgcaagacatgcagaccgactacagctgcaacgcgcgt
ttccacttcacccacaccattcaacagaagaatcccttcaccctcaaggtcctcaccacc
cgaggagttgcagaaagaacgcctagcttcatgtatccccagggcacctcaagcagtcag
atggtactacgaggcatggacctgctgctggagtgcattgcttctggagtcccaacacca
gacattgcatggtacaagaaaggtggggacctcccatccaacaaggccaagttcgagaac
tttaacaaggctctgcgcatcaccaatgtctccgaagaggactctggggagtatttctgc
ctggcctccaacaagatgggcagcatccggcacacgatctcggtgagagtaaaggctgct
ccatactggctggatgagcccaagaacctgatcctggctcctggtgaagatgggaggctg
gtatgccgagccaatgggaacccaaagccgactgtgcagtggatggtgaatggagaacct
ttgcagtcggcaccacccaatcccaaccgtgaggtggccggagacactatcatcttccgg
gacactcagatcagcagcagagcagtgtaccaatgtaacacatccaatgaacatggctac
ctgctggccaatgcctttgtcagtgtgttagatgtaccccctcggatgctgtctccccgg
aaccagctcatcagggtgatcctttacaaccggacacggctggactgtccgttctttggg
tctcccattccaacactccgatggtttaagaatgggcaaggaagcaacctggatggtggt
aactaccacgtgtatgaaaatggcagtctagaaatcaagatgattcgcaaagaggaccaa
ggcatctacacctgtgtggccaccaacatcctgggcaaagctgaaaatcaagtccgcctg
gaggtcaaagaccccaccaggatctacaggatgcctgaggaccaggtggccaagaggggc
accacggtgcagctggagtgtcgcgtgaagcatgacccctccttgaagctcacagtctcc
tggctgaaggatgacgagccactctacattggaaacaggatgaagaaggaagacgactcc
ctgaccatcttcggagtggcagagcgggaccaaggcagttacacgtgcatggccagcacc
gagctggaccaggacctggcaaaggcctacctcactgttctagctgatcaggccactcca
actaaccgtttggctgccctgcccaaagggcggccagaccgacccagggacctggagctc
actgacctggccgagaggagtgtgaggctgacctggatccctggggatgataacaacagc
cctatcacagactacgtcgttcagtttgaagaggaccagttccaaccaggggtctggcat
gaccactccaagttcccaggcagtgtcaactcagccgtcctccatctgtccccatatgtc
aactaccaattccgagtcatcgctgtcaacgaggttgggagcagccaccccagccttcca
tccgagcggtaccgaaccagcggggcaccccctgaatctaatcccagtgatgtgaagggc
gaagggacaagaaagaacaatatggagatcacatggacgcctatgaatgctacctctgcc
tttggccccaacctacgctacattgtcaagtggcgacggagagagacccgagagacttgg
aacaatgtgacagtgtggggctctcgatatgtggtggggcagacccctgtctacgtaccc
tatgagatccgagtccaggctgaaaatgactttgggaaaggccccgagcctgacaccgtc
attgggtactccggagaagatttacccagtgcccccaggcgtttcagagtccgacagccc
aacctggagaccatcaacctggagtgggaccacccagagcaccccaacggaatcctgatt
ggatacactctcagatacgtgccctttaatggaaccaaactgggaaagcagatggtggaa
aacttctctcccaatcagaccaagttctcggtgcagagagcagaccctgtgtcacgttac
cgattctccctcagtgccaggacgcaggtgggctctggagaagcagccacggaggagtcc
ccagcacctccaaatgaagctactccaactgcagctcctcccacgttgcccccgactacc
gtgggtaccacaggccttgtgagcagcactgatgctactgcccttgctgccaccagtgaa
gccacaacagttcccatcgtcccaactgtcgtacctaccaccgtcgccaccaccattgcc
acaactactacaaccactgctgccgccaccaccaccactacggagagtcctcccactacc
accactgggactaagattcacggaaccgcccccgacgagcagtccatttggaacgtcacg
gtgctccccaacagtaaatgggccaacatcacctggaagcacaatttcaggcctggaact
gactttgtggttgagtacatcgacagcaaccatacgaaaaaaactgtccctgttaaggcc
caggcccagcctatacagctgacagacctctttcccgggatgacgtacacgttgcgggtg
tattcccgggacaacgagggcatcagcagtaccgtcatcacctttatgaccagtacagct
tacaccaataaccaggcagacatcgccacccagggctggttcatcgggctcatgtgtgcc
attgcccttctggtgctgatccttctcatcgtctgcttcatcaagaggagtcgtggtggc
aagtacccagtgcgagaaaagaaggatgtccccttgggccctgaagaccccaaagaagaa
gatggctcgtttgactacagtgatgaggacaacaagcccctgcagggcagccagacatct
ctggatggcaccatcaagcagcaggagagtgacgacagcctagtggactacggcgaaggt
ggtgagggccagttcaatgaagatggctcctttatcggccagtacactgtcaaaaaggac
aaggaggaaaccgaaggcaatgagagttcagaggccacgtcgccagtcaatgccatctat
tccctggcctga
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