Arvicanthis niloticus (African grass rat): 117716126
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Entry
117716126 CDS
T08817
Symbol
Lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04151
PI3K-Akt signaling pathway
anu04382
Cornified envelope formation
anu04510
Focal adhesion
anu04512
ECM-receptor interaction
anu04518
Integrin signaling
anu05145
Toxoplasmosis
anu05146
Amoebiasis
anu05165
Human papillomavirus infection
anu05200
Pathways in cancer
anu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117716126 (Lamc2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117716126 (Lamc2)
04518 Integrin signaling
117716126 (Lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117716126 (Lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117716126 (Lamc2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117716126 (Lamc2)
09162 Cancer: specific types
05222 Small cell lung cancer
117716126 (Lamc2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117716126 (Lamc2)
09174 Infectious disease: parasitic
05146 Amoebiasis
117716126 (Lamc2)
05145 Toxoplasmosis
117716126 (Lamc2)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
Motif
Other DBs
NCBI-GeneID:
117716126
NCBI-ProteinID:
XP_034368926
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All DBs
Position
10:complement(40335939..40399831)
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AA seq
1249 aa
AA seq
DB search
MWHIPEGSLDRSLCTTPSAGPGLSQVEESIKHLIEEKGRHRLGAQQAPAAAERGPAMPAL
WLSCCFGVALLLPAAQATSRREVCDCNGKSRQCVFDQELHRQTGNGFRCLNCNDNTAGVH
CERCREGFYRQRDRDRCLPCNCHSKGSLSAGCDNSGQCRCKPGVTGPRCDRCQPGFHMLT
DAGCTRDQRQLDSKCDCDPAGISGPCDSGRCVCKPAVTGERCDRCRPGYYHLDRANPEGC
TQCFCYGHSASCHASADFSVHKITSTFNQDADGWKAVQRNGAPAKLHWSQRHRDVFSSAR
RSDPVYFVAPAKFLGNQQVSYGQSLSFDYRVDRGGRHPSAYDVILEGAGLQIRAPLMPPD
KTLPCGITKTYTFRLNEHPSSHWSPQLSYFEYRRLLRNLTALLIRATYGEYSTGYIDNVT
LISARPVSGAPAPWVERCVCPAGYKGQFCQECASGYKRDSARLGPFGACVPCNCQGGGAC
DPDTGDCYSGDENPDIECADCPIGFYNDPHDPRSCKPCPCHNGFSCSVMPETEEVVCNNC
PPGVTGARCELCADGFFGDPFGERGPVRPCQRCQCNNNVDPSASGNCDQLTGRCLKCIYN
TAGIYCDQCKAGYFGDPLAPNPADKCRACNCNPMGSEPGECQSDGSCVCKPGFGGLNCEH
EHAALTSCPACYNQVKIQMDQFTQQLQSLEALVSRAQGGGSAVPSGELEGRMQQAEQALR
DILREAQISEGAMRALSLQLAKARNQESNYKNRLDDLKMTVERIRALGGQYQNRVQDTSR
LISQMRLSLAESEASLQNTNIHSSEHYVGPNGFKSLAQEATRLADSHVESANTMKRLSRE
TEDYSKQALSLARKALSGGSGSGILDSSVVQGLMGKLEKTRSLTQQLSREGTQADIEAER
SYQHSLRLLDSASQLQGISDLSFQVEAKRIRQKADSLSNLVTRQTDAFTSVRNNLGNWEK
ETQQLLQTGKDGRQTSDQLLSRANLAKNRAQEALSMGNATFYEVENILKNLREFDLQVED
RKAEAEEAMKRLSYISQKVADASDKTQQAETALGSAAADTQRAKNAAREALEISSQIEQE
IESLNLEANVTADGALAMEKGLAILKSEMREMEGELARKELEFDTDKDAVQLVITEAQQA
DARAKSAGVTIQDTLNTLDSILHLIDQPGSVDEEGMMLLEQELFQAKTQINSRLRPLMSD
LEERTRRQRNHLHLLETSIDGILADVKNLENIRDNLPPGCYNTQALEQQ
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgtggcacattccagaaggatctctggaccgcagcctctgcaccacgccctcggcgggg
ccaggactgagtcaggtagaagagtcgataaaacacctgatcgaggaaaaaggaaggcac
agactcggcgcccagcaggcacccgcagcggcggagcgcggcccggccatgcctgcgctc
tggctcagctgctgcttcggtgtcgcgctcctgctgcccgcagcccaggctacctccagg
agggaagtctgtgattgcaatgggaagtccaggcagtgcgtctttgatcaggagctccat
cgacagacaggcaacgggttccgttgcctcaactgcaatgacaatacagccggggttcac
tgcgagagatgcagggagggattttaccggcagcgagacagagatcgctgcctaccctgc
aactgccactcaaaaggttccctcagtgctggatgtgacaactctggacaatgcaggtgt
aagccaggtgtgacaggacccaggtgtgaccggtgtcagccaggcttccatatgctcact
gatgctggatgtacccgagaccagaggcaactagattctaagtgtgactgtgacccagct
ggcatctctggaccctgtgattctggccggtgtgtctgcaaaccagccgtcactggagaa
cgctgtgataggtgccgaccaggctactatcatctggaccgggcaaaccctgagggttgt
acccagtgtttctgctacgggcattcagccagctgccacgcctctgctgacttcagtgtc
cacaaaatcacctcaactttcaatcaggatgctgatggttggaaagcagttcagagaaac
ggggcgcctgcaaaactccactggtcacagcgccatcgagacgtattcagctctgcccga
agatcagacccagtctatttcgtggcacctgccaaatttctcggaaatcagcaagtgagt
tacgggcagagcctgtcttttgactaccgagtggacagaggaggtagacacccatctgcc
tatgatgtgattctggaaggtgctggtctacagatcagagctcctctgatgccaccggac
aagacccttccctgtgggatcacaaagacttacacattcagattgaatgagcatccaagc
agtcactggagcccccagctgagttatttcgagtatcgaaggttacttcggaacctcaca
gccctgctgatcagagctacgtacggagagtacagtacagggtacattgacaatgtgacc
ctgatttcagcccgccctgtctctggagccccagcaccctgggttgaacgttgtgtatgc
cctgctgggtacaagggacaattctgccaggaatgtgcttctggttacaaaagagattcg
gcaagactggggccttttggtgcctgtgttccctgtaactgccaagggggaggggcctgt
gatccagacacaggagattgctactcaggggacgagaatcccgacattgaatgtgctgac
tgtcccattggtttctacaatgacccacacgacccccgcagctgcaagccatgtccctgt
cacaatgggttcagctgttcagtgatgcctgagacagaggaggtggtgtgtaacaactgt
ccccctggggtcacaggtgcccgctgtgagctctgtgctgatggcttctttggggatccc
tttggggaacgtggtccagtgagaccttgtcagcgatgccagtgcaacaacaacgtggac
cccagtgcctcagggaactgtgaccagttgacaggcagatgtttgaaatgtatctacaac
acagctgggatctactgtgaccagtgcaaagcaggttactttggagacccattggctccc
aacccagcagacaagtgtcgagcttgcaactgcaaccccatgggctcggagcctggagaa
tgtcaaagtgatggcagctgtgtttgcaagccaggctttggcggcctcaactgcgagcac
gagcacgcggccctaaccagttgtcctgcttgctacaatcaagtgaagattcagatggac
cagtttacccagcagctccagagcctggaggccctggtttcaagggctcagggtggtggt
agtgcagtccccagtggggagctggaaggcaggatgcagcaggctgagcaggcccttcga
gacattctaagagaagctcagatttcagaaggtgctatgagagccctcagcctgcagctg
gccaaggcaaggaaccaagagagcaactacaagaaccgcctggatgacctcaagatgact
gtggaaaggattcgggccctgggtggtcagtatcagaaccgagttcaggatacgagcaga
ctcatctctcagatgcgcctgagcctggcagaaagtgaagcttccctacaaaacacgaac
atccattcctccgagcactatgtggggccaaatggatttaaaagtctggctcaggaggcc
acaagattggcagacagccatgttgagtccgctaacacaatgaagcgactctcaagggaa
accgaggactattccaaacaagcactttcactggctcgcaaggctctgagtggaggaagc
ggaagcggcatcctggacagctccgtggtacaaggtcttatgggaaaattagagaaaacc
aggtccctgacccagcagttgtcaagggagggcacccaagccgacattgaagctgagagg
tcttatcaacacagtctccgcctcctggattcagcgtctcagcttcagggaatcagtgat
ctgtcctttcaggtagaagcaaagaggatcagacagaaggctgattctctctcaaacctg
gtgaccagacaaacagatgcattcacgagtgtgcgaaacaatcttgggaactgggaaaaa
gaaactcagcagctcctacagactggaaaggatgggagacagacttcagatcagctgctt
tcccgtgccaaccttgctaaaaacagagcccaagaagcgctaagtatgggcaatgccact
ttttatgaagttgagaacatcctaaagaacctcagagagtttgatctgcaggttgaagat
agaaaagcagaggctgaagaggccatgaagagactctcctatattagccagaaggttgca
gatgccagtgacaagacccagcaagcagaaacggccctggggagtgccgctgccgacacc
caacgggcaaagaacgcagctagggaggccctggagatcagcagccagatagagcaggag
atagaaagtctgaacttggaagccaatgtgacagcagatggggccttggccatggagaag
ggactggccattctgaagagcgagatgagagagatggagggggagctggccaggaaggag
ctggagtttgacacggataaggacgcggtgcagctggtgattactgaagcccagcaagct
gacgccagagccaagagtgccggagttacaatccaagacacgctcaacacattggacagc
atcctacacctaatagaccagcccggcagtgtggatgaggaggggatgatgctattagaa
caagagcttttccaagccaagacccagatcaacagtcggcttcggcccttgatgtctgat
ctggaagagaggacgcgtcggcagaggaaccacctccatctgctggagaccagcatagat
ggaattctagctgatgtgaagaacctggagaacattcgagacaacctgcccccaggctgc
tacaatacccaagctcttgagcaacagtga
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