Arvicanthis niloticus (African grass rat): 117716131
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Entry
117716131 CDS
T08817
Symbol
Tpr
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
anu05014
Amyotrophic lateral sclerosis
anu05200
Pathways in cancer
anu05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117716131 (Tpr)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117716131 (Tpr)
09162 Cancer: specific types
05216 Thyroid cancer
117716131 (Tpr)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117716131 (Tpr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117716131 (Tpr)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117716131 (Tpr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Nucleoprot-TPR
TPR
Seryl_tRNA_N
CEP162_coil_mid
Motif
Other DBs
NCBI-GeneID:
117716131
NCBI-ProteinID:
XP_034368934
LinkDB
All DBs
Position
10:37710889..37768418
Genome browser
AA seq
2433 aa
AA seq
DB search
MPSGGSIPRSGHRGVLMTSRSFDGSRRGSLRRAGARETASEAADGAAQASGLRTSPCSFA
SPSAAAVATPADMAAVLQQVLERPELNKLPKSTQNKLEKFLAEQQSEIDCLKGRHEKFKV
ESEQQYFEIEKRLSQSQERLVNETRECQNLRLELEKLNNQVKVLTEKNKELETAQDRNLG
IQSQFTRTKEELEAEKRDLIRTNERLSQEVEYLTEDVKRLNEKLKESNTTKGELQLKLDE
LQASDVAVKYREKRLEQEKELLHNQNSWLNTELKTKTDELLALGREKGNEILELKCNLEN
KKEEVLRLEEQMNGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNL
YKSAADDSEAKSNELTRAVDELHKLLKEAGEANKTIQDHLLQVEESKDQMEKEMLEKIGK
LEKELENANDLLSATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQ
LLLEKLENKRINKYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQRL
QEDTDKANKHSSVLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISS
SSEVISQHLVSYRNIEELQQQNQRLLFALRELGETREREEQETTSSKIAELQHKLENSLT
ELEQLRESRQHQMQLVDSIVRQRDMYRILLSQTTGMAIPLQASSLDDISLVSTPKRSSTS
QTVSTPAPVSVIESTEAVEAKAALKQLQEIFENYKKEKIDSEKLQSEQLEKLQEQVTDLR
SQNTKISTQLDFASKRYEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQDLR
GANEKLAVAEVRAENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILER
SETETKQRLSSQIEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEMNLHL
NTKELLKNSQKDIATLKQHLNNMEAQLASQSTQRTGKGQPGDRDDIDDLKSQLRQAEEQV
NDLKERLKTSASNVEQYRAMVTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKL
MEVEKEKQELQDDKRKAIESMEQQLTDLKKTLSTVQNEVQEALQRASTALSNEQQARRDC
QEQAKIAVEAQNKYERELMLHAADVEALQAAKEQVSKMTSIRQHLEETTQKAESQLLECK
ASWEERERVLKDEVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVTSMKEVVQAPLNVSLNE
EGKSQEQILEILRFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREK
VQVTAKTMAQHEELMKKTETMNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILPLQ
EANAELSEKSGMLQAEKKLLEEDVKRWKARNQHLINQQKDPDTEEYRKLLSEKEIHTKRI
QQLNEEVGRLKAEIARSNASLTNNQNLIQSLKEDLSKVRTEKENIQKDLDDKIIDIQEKV
KTITQVKKIGRRYKTQFEELKAQQNKAMETSTQSSGDHQEQHFSVQEMQELKDTLSQSET
KTKSLEAQVENLQKTLSEKETEARSLQEQTVQLQSELSRLRQDLQDKTTKEEQLRQQMNE
KDEKTWKAIAVARSKIAQLSGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEG
RISRLERELREHQERHLEQRDEPQEPTNKAPEQQRQITLKTTPASGERGIASTSDPPTAN
IKPTPVVSTPSKVTAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEA
MQSEGPVEHVPVFGSASGSVRSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQIEP
ANQELSPNIVEVVQSSPVERPSTSTAVFGTVSATPSSSLPKRTREEEEDSTMEAGDQVSE
DTVEMPLPKKLKTVTPVGTEEEVMAEESTDGEAETQAYNQDSQDSIGEGVTQGDYTPMED
SEETSQSLQIDLGPLQSDQQTTSSQDGQGKGDDVIVIDSDDEDDDEENDGEHEDYEEDEE
DDDDDEDDTGMGNEGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGAESNQR
AADSQNSGEGNTSAAESSFSQEVAREQQPTSASERQTPQAPQSPRRPPHPLPPRLTIHAP
PQELGPPVQRIQMTRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFA
EAIHSPQVAGVPRFRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRS
VPTTPLQVAAPVTVFTESATSDASEHASQSVPMVTTSTGTLSTTNETAAGDDGDEVFVEA
ESEGISSEAGLEIDSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQT
TLRQGVRGRQFNRQRGISHAMGGRGGINRGNIN
NT seq
7302 nt
NT seq
+upstream
nt +downstream
nt
atgccctctggtggctcgattcctagaagtggccacagaggagtactcatgacatcccgg
agtttcgacgggtcccgccgcgggagtctccggcgggcaggcgcgcgggagactgcgagc
gaggcggcggacggagcggcacaggcgtctgggctccgcacttctccttgctccttcgct
tctccttcagccgctgctgtcgcgaccccggccgacatggcggcggtgttgcagcaagtg
ttggagcgcccggagctgaacaagctacctaagtcgacccagaacaaacttgagaagttc
ttggccgaacagcagtccgagatcgactgcctgaaggggcggcacgagaaatttaaggtg
gagagtgaacaacaatactttgagatagagaagaggctatcccagagtcaggagaggctt
gttaatgaaacccgggagtgtcagaacttgaggctggagcttgagaagctaaataaccaa
gtaaaagtgttaactgagaaaaacaaagaacttgaaactgctcaagaccgtaatctaggc
attcagagtcagtttacaagaacaaaggaagagttagaagctgaaaaaagagatttaatc
agaaccaatgagaggttatctcaggaagttgaatatttaacagaggatgttaaacgtcta
aatgaaaaacttaaagaaagcaatacgacaaagggtgaacttcagttaaagctggatgaa
cttcaagcttctgatgttgctgtaaagtaccgagaaaaacgcttagagcaagaaaaggaa
ttgctacacaatcagaattcatggctgaacacagagttgaaaaccaaaactgatgagctg
ttggctctaggaagagaaaaaggaaatgaaatcttggaacttaagtgtaatctcgaaaac
aaaaaagaagaggttttgagactggaagaacagatgaatggcttgaaaacatcaaacgaa
catcttcagaaacatgtagaggatttgttgacaaaattaaaagaggccaaagaacagcag
gccagcatggaagagaaattccacaacgaattaaatgctcacataaagctgtctaatcta
tacaagagcgctgctgatgactcggaggcaaagagtaatgaactaactcgggcagtggat
gagctgcacaaactgctcaaagaagctggagaagccaacaaaacaatacaagatcatctt
ctacaagtggaagaatctaaagatcaaatggaaaaagaaatgcttgagaaaataggaaaa
ttggaaaaggaattagagaatgcaaatgacctgctttccgctacaaaacgtaaaggagct
atattgtctgaagaagagcttgcagccatgtctcctaccgcagcagccgtagctaaaatt
gtaaagcctggcatgaaattaactgagctgtataatgcctatgtggaaacccaggatcag
ttgcttttggaaaaactagaaaataaaaggattaataagtatctggatgagatagtaaaa
gaagtggaagccaaagcaccgattttgaaacgccagcgtgaagagtatgagcgtgcgcag
aaagctgtggccagtctgtccgcaaagcttgaacaagctatgaaggagattcagcgattg
caagaggatactgataaagccaacaaacattcatcagtacttgaaagggacaaccagaga
atggaaatacaaataaaagatctttcacaacagattagagtgcttttgatggaacttgaa
gaagcaaggggtaaccatgtgattcgggatgaggaggtcagctctgcggacataagtagt
tcgtctgaagtcatttcgcagcatctagtgtcttataggaatattgaagagcttcagcag
cagaatcagcgtctgctatttgctcttcgagaacttggggaaaccagggaacgagaagaa
caagagacaacttcctctaaaattgctgaacttcagcataaacttgagaactctctcact
gaactggaacagctccgggagtcacgacaacatcagatgcagcttgttgattctatagtt
cgtcagcgtgacatgtaccgaattttattatcacaaacaacaggaatggccattccatta
caagcttcaagtttagacgatatttctcttgtgtcaactccaaaacgttcaagtacatca
cagactgtttctactcctgctccggtgtctgtcattgaatccacagaggctgtagaagca
aaggctgctcttaaacagttgcaggaaatctttgagaactataaaaaagaaaaaatagac
agtgaaaaacttcaaagtgagcagctagagaaacttcaagagcaagtcacagacctacgc
tcacaaaacaccaagatttctactcagctagattttgcttctaaacgttatgaaatgcta
caagataatgtagaaggatatcgccgagaaataacatctctacaagagagaaatcagaaa
ctcactgcaacgacccagaagcaggaacagatcatcaacacgatgacacaagacttgaga
ggagccaatgagaagctagctgttgcagaagtaagagcagaaaatttgaagaaggaaaaa
gagatgcttaaattgtctgaagttcgtctgtctcagcaaagagagtctttgttagctgaa
cagaggggacagaacttgttgctgactaatctacaaacaatccagggcatactagagcgg
tctgagactgaaaccaaacaaaggctgagtagccagatagaaaaattggagcatgagatc
tctcacctgaagaagaagttggaaaacgaggtggaacaaagacatacgcttacgaggaat
ctagatgttcaactcttagataccaagagacagctagatacagaaatgaatcttcatctg
aacacaaaagaactgttaaaaaattctcagaaggacattgctacactgaaacagcacctt
aataatatggaagcccagcttgcttctcagtccacacagagaaccggtaaaggtcagcct
ggtgacagagatgacattgatgatcttaaaagtcagctcaggcaggctgaagaacaggtc
aatgacttgaaagagagactcaagacaagtgccagtaatgtggagcagtaccgagccatg
gtgaccagcttagaggactccttgaacaaggagaaacaggtaactgaggaggtacataag
aacattgaagttcgtttgaaagaatcagcggagtttcagacacaattggagaaaaagtta
atggaagtagagaaggagaagcaagaacttcaggatgacaagaggaaagccatcgagagc
atggagcagcaattaactgacttgaagaaaacactgtctactgttcagaatgaagtacag
gaagctcttcagagagcaagcacagctttaagtaatgaacagcaagccaggcgtgactgt
caagagcaagctaaaatagctgtggaagctcagaataagtatgagagagaattgatgcta
catgctgctgatgtcgaagctctgcaggctgccaaggaacaggtttcaaaaatgacatca
atccgtcagcatttggaagaaacaactcagaaagcagaatcacagttgttggaatgtaaa
gcatcttgggaagaaagagagagagtgttgaaggatgaagtttccaagagtgtgtctcgc
tgtgaagatctagagaaacaaaacagactacttcatgatcaaatcgaaaaattaagtgac
aaggtggtcacctctatgaaagaggttgtgcaggcaccattaaatgtatctctcaatgaa
gaaggaaaatctcaagaacaaattttagaaattcttagatttattcgacgagaaaaagaa
attgctgaaactaggtttgaggtggctcaggttgagagtctgcgataccgacaaagagtt
gaacttctagaacgggagttgcaagaactgcaggatagcctgaatgctgaaagggaaaag
gtgcaggtaactgcaaaaacaatggctcagcatgaagaactgatgaagaaaactgaaaca
atgaatgtagttatggagaccaataagatgctaagggaggaaaaggaaagacttgaacag
aacctacaacagatgcaagcgaaggtgaggaaactggagttagacattttacccttacaa
gaagccaatgctgagctgagtgagaaaagcggcatgctccaggcagaaaagaagctacta
gaagaggatgtgaagcgttggaaagcacggaaccaacatctaataaatcaacagaaagat
ccagatacagaagaatatcgaaagttgctttctgaaaaggaaattcacactaagagaatt
cagcagctaaatgaagaagttggaagacttaaggctgaaattgcaagatcaaatgcatcc
ttgactaacaaccagaatttaatccagagtctgaaggaagatttgagtaaagtacgaact
gaaaaggaaaacattcagaaagatttagatgacaaaataattgatatacaggaaaaagtc
aaaacaatcactcaagtcaagaaaattggacgcaggtacaagactcagtttgaagaactt
aaagcgcagcaaaataaggccatggagacttccactcagtcttcaggagaccatcaggaa
cagcacttctctgtccaggaaatgcaggagctcaaagacaccctcagccaatctgaaaca
aagacaaagtcacttgaggctcaagtagagaatctgcagaagacattatctgaaaaagag
acagaagcaagaagtctccaggaacagactgtgcagcttcagtctgaactgtcacgcctt
cgtcaggacctccaggataaaaccacaaaggaggagcagctccgacagcaaatgaatgaa
aaggatgaaaaaacatggaaggcgattgcagtagccagatcaaaaattgcacaactatct
ggtgtgaaagatcagttaactaaagaaaatgaagagcttaaacaaagaaatggagcttta
gatcagcagaaagatgagctcgatgtccggatgactgctcttaagtcccagtatgaaggt
cggattagtcgcttagaaagagagctcagagagcatcaagagagacatcttgagcagaga
gatgagcctcaggaacccactaataaggctccagaacagcagagacaaatcacactgaaa
accactccagcttctggtgaaagaggaattgccagcacatcagacccaccaacagccaat
atcaagccaactcctgttgtttctactccaagtaaagtgacagctgcagctatggctggg
aataagtcgacacccagggcaagtatccgcccaatggttacacctgccactgtcacaaat
ccaaccactaccccaacagcaacggtaatgcctactacacaggtggagtcacaggaagct
atgcagtcagaaggacctgtggaacatgttcctgtatttggaagcgcaagcggatctgtt
cgttctactagtcctaatgttcagccctccatttcccagcccatcctaactgtacagcag
caaacacaggctacagcttttgtacaacccactcaacagagtcaccctcagattgagcct
gcaaatcaagagttgtccccaaacatagttgaggtggtacaaagttcaccagtggagcgg
ccatctacctccacagcagtgtttggcactgtttcagctaccccaagttcttccttgcca
aagcgcactcgggaggaggaggaggacagcaccatggaagcaggagaccaagtctctgaa
gacacagtggaaatgcctctcccaaagaagctgaagacggtcacacctgtgggaactgag
gaagaagttatggcagaagaaagtactgatggagaggcagaaactcaagcctataatcag
gattctcaagattccattggagaaggagtcacccagggagattatacaccaatggaagac
agtgaagaaacatcacagtctctacaaatcgatcttggaccacttcaatcagatcagcag
actacttcctctcaggatggtcaaggcaaaggagatgatgtaattgtaattgacagtgat
gatgaagatgatgatgaagaaaatgatggcgaacatgaagattatgaagaagatgaagaa
gatgatgatgatgatgaagatgacacggggatgggaaatgagggtgaagatagtaatgaa
ggaactggtagtgcagatggtaatgatggatatgaagctgatgatgctgagggtggtgat
gggactgatccaggtacagagacagaagaaagtatgggtggagctgaaagtaatcagaga
gctgctgattctcaaaacagtggtgaaggaaatacaagtgcagcggagtcgtctttctct
caggaggttgctagagaacagcagcccacatcagcatctgagagacagaccccacaagca
ccacagtcaccaagacgcccaccacatcctcttcccccacgcctgaccattcacgctcca
cctcaggagttgggaccaccagttcagagaattcagatgacccggaggcagtctgtaggg
cgtggtcttcagttgactccaggaataggtggcatgcaacagcacttttttgatgacgaa
gacagaacagttccgagtaccccaacgcttgtggtgccacatcgcactgatgggtttgct
gaagctattcattccccacaggttgcaggtgttcctagattccggtttgggccacctgaa
gacatgccacagacaagttccagtcactctgatcttggccagcttgcttctcaaggaggt
ttgggaatgtatgaaacacccctctttctggctcatgaggaagagtctggtggccgcagt
gttcccactacgcctctccaagtagcagccccagtgactgtgtttactgagagtgccacc
tctgatgcttcagaacatgcttctcagtctgttccgatggtgacaacgtctacaggcact
ttatccacgacaaatgagacagcagcaggtgacgacggagatgaagtgtttgtagaggcg
gagtctgaaggtattagttcagaggcaggcctagaaattgatagccagcaggaagaagag
cctgtccaagcgtctgatgaatcagatcttccctcaaccagccaagatcctccttccagc
tcctctgtggataccagtagtagtcagccgaagcctttcagacgagtaagacttcagacg
accttgagacagggtgttcgtggtcgtcagtttaaccgacaaagaggtataagccatgca
atgggaggaagaggaggaataaatagagggaatattaattaa
DBGET
integrated database retrieval system
