Arvicanthis niloticus (African grass rat): 117716153
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Entry
117716153 CDS
T08817
Symbol
Tdrd5
Name
(RefSeq) tudor domain-containing protein 5 isoform X1
KO
K18407
tudor domain-containing protein 5
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117716153 (Tdrd5)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117716153 (Tdrd5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OST-HTH
TUDOR
Motif
Other DBs
NCBI-GeneID:
117716153
NCBI-ProteinID:
XP_034368977
LinkDB
All DBs
Position
10:complement(43258489..43311782)
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AA seq
1046 aa
AA seq
DB search
MSEQERIQDCLRKEIRSLLISTKDGLTPQQLEKEYLLMVGNHLPLRILGYRSTMELVLDM
PDVVSVCPCGDGTVILKAIPDESTKGIASLVAKQRRSHKVRNSMQKGRTSVCSGRVPYRG
RVPPILPAVVKSELKDLLALSPVLLSDFEKAFAKRFGRSFQYMQYGFLSMFEVLNAASDV
ISVEQTRAGSLLTLKKSLSEEKQRVWPAGKIFTQPFRMKQQGSYSTGFPVTKTRFPQPTS
NMEPPKQVLSMEKIPTFNAVETSRLNHTEKLNQLESTFKSVIAQIGPGGTVDPDLKRKIK
FVVSKFPQGLFISKLLGEFELIFKEQLSPKQLGFLNVTELVGALSDILRVEFSEEKQDLL
VFDADLKPLLPGGPLSSVRNSCLVQPDKKTDANSWTSSPSRNSLSTVAVKTTTWDCPVKN
HKEPEQKIYKKPNLVVKPLQLQIETNKSQIGMSVPNHDIPPDAVRAKKLCRLPPLDTSTL
VGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYIMPEYFIQPGHLC
CVRISEDKWWYRVIIHRILGKKEVEVFYPDFGNIGTVQKSSLRFLKCCYTKLPAQAIPCS
LAWVRPAEEQWTSKAILHFQKLCGLKPLVGVVDEYIDGILNIFLCDTSSNEDVYFHHVLR
TEGHAIVCRENAPSKGFRDLNPPALYTNSCSVPGDMVLTELGHPAQQHCLNEDREILQQP
QQDINDEKSISHLKPASRELLKDSKLSSLKTHKSCEEDPQWSILQPKDPKEENEDEVPTG
MPCLESVAIVDDIWDENWLPLQAKMGKAGGAASYLFTSNHVGKKQYQTRGEMTQKDWCFS
TSKDIWDDSWQPLGLANDVKEGIHTPEGPRAQEKNTGTTQIRKQPDLQYPLDSSTLPKLE
EFYISLIKSQQSAEGNQSEPASIQTQPKPGQASSTVPSPTPPVVDSPENHAGSVESSPGS
LQKEEFSNSQADTVDKDKSQGAIDQLSFILSPQHQISQKLYIPRSTATAVLGAAARLATS
RSLLHWYPSVKGRKLEGQEVEREGVK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaagagcgtatacaggactgtctgaggaaagagataaggtcccttcttatt
tccactaaagatggtttgactccacaacagttggaaaaggagtaccttttgatggttggc
aaccatctacccctccgaatccttggatatcggtccactatggaactggtgttggatatg
cctgatgtggtcagcgtgtgcccctgtggggatggtactgtaatattgaaagccattcca
gatgaatccaccaaaggaatagctagtttggttgcgaagcagagaaggagccataaggtc
cggaactccatgcaaaagggaagaaccagcgtttgctctggccgggtgccttaccgtgga
agggtgccccctattcttccagccgtagtgaagagtgagttgaaagaccttttggcattg
tctcctgttctcctttctgactttgaaaaggcatttgccaagcgttttggacgatcattt
cagtatatgcagtatggattcctctctatgtttgaagtgctgaatgcagcttcggatgtc
atttctgtagagcagaccagagcaggttctctgttgacactaaaaaagagtctatcagag
gaaaagcagagagtctggccagcaggtaaaatttttactcagccatttagaatgaaacaa
caggggtcatattctacaggattcccagtaacgaagacacgctttccacaacccacttca
aatatggagcccccgaagcaagttctgagcatggagaagatacccacgtttaacgcagtg
gagacttcaaggctgaaccacactgaaaaattaaaccagttggaaagcacattcaaatcc
gtaattgcacaaattggacctggagggactgttgatccagacctaaagcgcaagataaaa
tttgtcgtatctaagtttccacaaggtttgtttatttctaaactgcttggagagtttgag
ctaattttcaaagagcaactttcaccaaaacaattagggttcttaaacgtgacagagctt
gttggtgctctcagcgacattctccgagttgagttcagtgaagaaaagcaagatttgctc
gtgtttgacgctgacctgaagcctctgctgcctggtggaccgctttcatcagtcagaaat
tcgtgtttagttcaaccagacaagaaaacagacgctaactcttggacctccagtccctct
agaaattcactatccactgtagcagttaagacgaccacatgggattgccctgtgaagaac
cacaaggagccagaacagaagatatacaagaagcctaacctggtggtaaagcctttacag
ctgcaaatagaaacaaacaagtcacagatcggcatgtcagtgccaaaccatgacattcca
ccagatgctgtacgtgccaagaaattgtgcagacttcctccattagacaccagcaccctt
gtgggggtcttcgtagagtatataatctctcctagtcagttctatatccggatctacagc
agagattcatcagaattactggaagacatgatgattgagatgcgacgctgctattccaac
cagctggtctctgatcggtatattatgccagaatattttatccaaccaggacatctctgc
tgtgtaaggatctctgaggacaagtggtggtaccgggttattatccatcggatccttggg
aaaaaggaagttgaagtgttctacccagatttcggaaatataggaactgtccagaagtcc
tcactgaggttcctcaaatgctgctacacaaagcttccggctcaggctatcccttgctct
ttggcatgggtgaggcccgcagaggaacagtggacatccaaagctattttgcacttccag
aagctgtgtggtttgaagccgttagtaggggtggtagatgagtatatagacggaatcctt
aatatttttctttgtgatacatcctcaaatgaagatgtatattttcatcacgtcttgagg
acagaaggccatgctatcgtatgcagagaaaatgccccatccaagggcttcagggatcta
aacccgccagcactgtatactaactcgtgctcagtgcccggtgacatggtcctgacagag
ctggggcaccctgctcagcagcactgtctgaatgaagacagggagatactgcagcaaccc
cagcaagatattaatgatgaaaagtctataagtcaccttaaacccgcgtccagggagtta
ttaaaggattctaaattgagttcattgaaaacacataagagctgtgaagaggacccacag
tggtccatcctgcagcccaaggatccgaaggaagaaaatgaggatgaggtccccactgga
atgccatgcctggagtcagtggccatagttgatgatatctgggatgaaaactggctacct
ctgcaggccaaaatggggaaagcagggggtgctgcctcttatctatttacctcaaaccat
gttgggaagaaacagtatcagacacgcggagaaatgacacaaaaggattggtgtttttct
acatctaaagatatatgggatgattcctggcagcccttaggccttgcaaatgatgtgaaa
gaaggaattcacacaccagaagggcccagggctcaagagaaaaatactggcacaacccaa
attcgaaagcagccagatttacagtatcctctggattcttccacactgcccaaactggaa
gagttctacatctctctgatcaaatcgcagcagtcagcagaagggaaccagtctgaacct
gccagcattcagactcagcctaagcctgggcaggcatcctccactgtacccagtccaacc
cctcctgtggttgactctccagaaaaccatgctggctctgtggaaagctctccagggagc
ctacagaaggaagagttttctaacagccaggctgacacggtggacaaggacaagagtcag
ggggccatagaccagctctctttcattttgtccccccagcaccagatttctcagaagctc
tacatccctcgaagtacagccacggctgtcttgggagctgcggcgcggttagccacatcc
aggagcctcctgcactggtaccccagtgtgaaaggacggaagcttgagggacaagaggtg
gagagagagggagtgaagtag
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