Arvicanthis niloticus (African grass rat): 117716202
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Entry
117716202 CDS
T08817
Symbol
Astn1
Name
(RefSeq) astrotactin-1
KO
K24479
astrotactin
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
anu04990
]
117716202 (Astn1)
Domain-containing proteins not elsewhere classified [BR:
anu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117716202 (Astn1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
ASTN1_2_fn3
Annexin_2
FXa_inhibition
ASTN_2_hairpin
EGF_Tme5
TM_ErbB1
MACPF
Motif
Other DBs
NCBI-GeneID:
117716202
NCBI-ProteinID:
XP_034369052
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Position
10:45274935..45581371
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AA seq
1294 aa
AA seq
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MALAGLCALFACCWGPVAVLATAAGDVDPSKELECKLKSITVSALPFLRENDLSIMHSPS
ASEPKLLFSVRNDFPGEMVVVDDLENTELPYFVLEISGNTEDIPLVRWRQQWLENGTLLF
HIHHQDGAPSLPGQDPTEEPQHESAEEELRILHISVMGGMIALLLSILCLVMILYTRRRW
CKRRRVPQPQKSASAEAANEIHYIPSVLIGGHGRESLRNARVQGHNSSGTLSIRETPILD
GYEYDITDLRHHLQRECMNGGEDFASQVTRTLDSLQGCNEKSGMDLTPGSDNAKLSLMNK
YKDNIIATSPVDSNHQQATLLSHTSSSQRKRINNKARAGSAFLNPEGDSSTEAENDPQLT
FYTDPSRSRRRSRVGSPRSPVNKTTLTLISVTSCVIGLVCSSHVSCPLVVKITLHVPEHL
IADGSRFILLEGSQLDASDWLNPAQVVLFSQQNSSGPWAMDLCARRLLDPCEHQCDPETG
ECLCYEGYMKDPVHKHLCIRNEWGTNQGPWPYTIFQRGFDLVLGEQPSDKIFRFTYTLGE
GMWLPLSKSFVIPPAELAINPSAKCKTDMTVMEDAVEVREELMTSSSFDSLEVLLDSFGP
VRDCSKDNGGCSKNFRCISDRKLDSTGCVCPSGLSPMKDSSGCYDRHIGVDCSDGFNGGC
EQLCLQQMAPFPDDPNLYNILMFCGCIEDYKLGVDGRSCQLVTETCPEGGDCGESREVPM
NQTLFGEMFFGYNNQSKEVATGQVLKGTFRQNNFARGLDQQLPDGLVVASVPLENQCLEE
ISEPTPDPDFLTGMVNFSEVSGYPVLQHWKVRSVMYHIKLNQAAISQAFSNALHSLDGAT
SRADFVALLDQFGNHYIQEAVYGFEESCSIWYPNKQVQRRLWLEYEDISKGNSPSDESEE
RERDPKVLTFPEYIASLSDSGTKRMAAGVRMECQSKGRCPSSCPLCHVTSSPETPPEPVL
LEVTRASPIYELVTNNQTQRLLQEATMSSLWCSGTGDVIEDWCRCDSTAFGADGLPTCAP
LPQPVLRLSTVHEPSSTLVVLEWEHSEPPIGVQIVDYLIRQEKVTDRMDHSKVETETVLS
FVDDIISGAKAPCAMPSQVPDKQLTTISLIIRCLEPDTIYMFTLWGVDNTGRRSRPSDVI
VKTPCPVVDDVKAQEIADKIYNLFNGYTSGKEQQTAYNTLLDLGSPTLHRVLYHYNQHYE
SFGEFTWRCEDELGPRKAGLILSQLGDLSSWCNGLLQEPKINLRRGSLKYLGCRYSEIKP
YGLDWSELSRDLRKTCEEQTLSVPYNDYGDSKDI
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggctttagccgggctctgcgccctgttcgcctgctgctgggggccggttgcggtgctg
gccacagctgccggcgacgtggatccatccaaggagctggagtgtaagctcaagagcatc
actgtgtcggcactgcccttcctgcgtgagaacgacctgagcatcatgcacagtccctcg
gcctccgaacccaagcttctcttctctgtgcgcaatgacttccccggagaaatggtcgtt
gtggacgacctagagaacacggagctaccctacttcgtgctggagatctcagggaataca
gaagacatccccctggtgcgctggaggcagcaatggctggagaatggtactttgcttttt
cacatccaccaccaagatggtgctccaagtctccctgggcaagacccaactgaagaaccc
caacatgaatcagcagaagaggaactgaggatccttcacatctcagtcatgggtggcatg
atcgctctgttgctatccatcttgtgcctggtgatgatcctgtacactcgcaggcgctgg
tgcaaacgtcgccgggttcctcagccccagaaaagtgccagtgcagaggcagccaatgag
atccactacatcccatctgtgctgattggaggccatgggcgggaaagcttgcgcaatgcc
cgtgtgcagggccacaactccagtggcactctgagcatccgggagacacctatcctggat
ggctatgagtatgacatcacagacctgcgtcaccacctgcagagggagtgcatgaatgga
ggggaggactttgccagtcaagtcacacgcactttggactccctacaaggctgcaatgag
aagtctgggatggacctcacaccaggaagtgacaatgccaagctttccctgatgaacaag
tataaagataatatcatagccacaagccccgtggattccaaccaccagcaagccactctg
ctctcccatacctccagcagccagagaaagaggatcaacaataaagcaagagctggttcc
gccttcttgaaccctgaaggggactccagcacagaggcagaaaatgacccacagctgacc
ttttacacagacccgtctcggagccggaggcgcagtcgagtgggctctcccagaagtcct
gtgaataagaccaccttgaccctgatcagtgtcaccagctgcgtgattggcctcgtgtgc
tcttctcatgtcagctgccctcttgttgtcaaaatcaccctacacgtccccgagcacttg
attgctgatgggagccgcttcatcctgctggaggggagccagctggatgccagtgactgg
ctgaaccctgcccaagtggttctcttctctcagcagaactccagcgggccctgggccatg
gacctctgtgcccggcggctcctggacccttgtgaacatcaatgtgaccccgaaactggg
gaatgtctgtgctatgaaggctacatgaaggatcctgtccacaagcacctttgcattcgg
aatgaatgggggaccaaccaggggccttggccttacacaatatttcagcgaggctttgac
ctggttttgggagaacaaccctctgataaaatattcagattcacctataccctgggggaa
ggcatgtggttgcccctcagtaagagctttgtgattccaccagctgaactagccatcaat
ccatcagcaaagtgtaagacggacatgactgtgatggaggatgctgtggaggtcagagag
gagctgatgacgtcatcatccttcgacagcctagaggtcctcttagactcctttgggcca
gtgcgtgactgcagcaaagataacggaggctgcagtaagaattttcgctgcatttcagat
cgaaagttggactctactggttgcgtgtgcccttcaggactcagccctatgaaggacagc
tcaggctgctatgaccgccacattggagtggactgctcagatgggttcaacggcggctgc
gaacagctgtgtctccagcagatggcgccattcccggatgaccccaacttgtacaacatc
ctcatgttctgtgggtgtatcgaagactacaagcttggtgtggatggacggtcttgtcag
cttgtcacagagacctgcccagagggcggtgactgtggggaaagcagagaggttcccatg
aaccagactctctttggagaaatgttctttggttacaacaaccagtccaaggaagtagcc
actggacaggtgctaaaaggaacattcagacaaaacaactttgctcgtggtttagaccag
caactgccggatggtcttgtggttgcctctgtcccactggaaaatcagtgtctagaggaa
atctcagagcccactcctgaccctgacttcttgactgggatggtgaacttcagtgaagtg
tctggatacccagtgctgcagcactggaaggttcggtctgtgatgtaccacatcaaactc
aaccaagcagccatctctcaggccttcagcaatgctcttcactccttggatggagctaca
tctcgtgcagattttgtggctttgctggatcagtttggtaaccattacatccaggaagct
gtctatggctttgaggaatcttgttctatatggtacccaaacaagcaagtccagcggaga
ctctggctggaatatgaagatatcagtaaaggcaactccccatctgatgagtcggaggag
cgagaaagggatcccaaggtgctgacattcccagaatacatcgctagcctgtcagactct
ggcaccaagcgtatggcagctggagtccgaatggagtgccagagcaagggacggtgtccc
tcatcctgtcctttgtgtcatgtgacatctagccctgaaacccctcctgagccagttctg
ctggaagtgaccagagcatcccctatctatgaactagtgaccaataaccagactcagagg
ctcttacaggaggccaccatgagctctctctggtgttcagggactggagatgtcattgag
gactggtgtcgatgtgactctactgcttttggagcggatggactccctacctgtgcaccc
ctcccacagcctgtgctgaggctctccacagtacatgaacccagcagcaccctcgtggtc
ctggagtgggaacattcagagccaccaattggagtgcagattgtagattacctgatccgg
caagagaaagtcactgaccggatggaccactccaaagtagagacggaaacagtgctgagc
tttgtagacgacatcatctctggagcaaaggctccatgtgccatgccatctcaggtgcca
gacaagcagcttaccactatttctctcatcatccgatgcctggaacctgacactatttac
atgttcaccctctggggagtagacaacacagggcgacgctccaggccaagtgatgtgatt
gtgaagactccatgtcctgtggtagatgatgtcaaagcccaagaaatagcagacaagatc
tacaatctcttcaatggctacaccagtggaaaggagcaacagaccgcctacaacaccctt
ctggatctgggttcgcccactttgcatcgagttctctaccactataaccagcactatgag
agttttggggaatttacctggcggtgtgaagatgagttaggacccaggaaagcaggcctc
atcctttcccagcttggagatctgagcagctggtgcaatggactccttcaggagcccaag
ataaacttgaggcgtggttcactcaagtacctgggctgccgctacagtgagatcaaacct
tatggactggactggtcagagctcagccgggacctcaggaagacatgtgaggaacagacc
ttgagtgtcccctacaatgactatggggacagcaaagacatctag
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