Arvicanthis niloticus (African grass rat): 117716229
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Entry
117716229 CDS
T08817
Symbol
Pou2f1
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu05168
Herpes simplex virus 1 infection
anu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117716229 (Pou2f1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
117716229 (Pou2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117716229 (Pou2f1)
03021 Transcription machinery [BR:
anu03021
]
117716229 (Pou2f1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117716229 (Pou2f1)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
117716229 (Pou2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117716229
NCBI-ProteinID:
XP_034369093
LinkDB
All DBs
Position
10:complement(52517862..52649590)
Genome browser
AA seq
793 aa
AA seq
DB search
MADGGAASQDESSAAAAAAADSRMNNPSETNKSSMESGDASTGTQTNGLDFQKQPVPVGG
AISTAQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSNEEPGDSQQSSQPSQQPSVQSAI
PQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASA
ATPMTQIPLSQPIQIAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQG
LLQAQNLLTQLPQQSQANLLQPQPSITLTSQPTTPTRTIAATPIQTLPQSQTTPKRIDTP
SLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFK
NMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIETNIRVALE
KSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSNSPIKAIFP
SPTSLVATTPSLVTSSTATTLTVNPVLPLTSAAVTNLSLADQGLDLRRGCSWEMLRSPPD
GVTTTAGTTDSTSNSTATVISTAPPASSAVTSPSLSPSPSASASTSEASSASETSTAHTT
STPLPSPLGTSQVMVTASGLQTAAAALQGAAQLPANASLAAMAAAAGLNPGLMAPSQFAA
GGALLSLNPGTLGGALSPALMSNSTLATIQALASSGSLPITSLDATGNLVFANAGGAPNI
VTAPLFLNPQNLSLLTSNPVSLVSAAAASTGNSAPTASLHASSTSTESIQNSLFTVASAS
GAASTTTAASKAQ
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcagccgcggcggcagcagcagca
gactcaagaatgaacaatccgtcagaaaccaataaatcatctatggagagtggagatgca
agcacaggcacacagaccaatggcctggactttcagaaacagcccgtgcctgttggaggc
gcaatctccacagcccaggcccaggctttccttggacatcttcaccaggtccagcttgct
gggacaagtttacaggctgctgctcaatctttaaatgtacagtctaagtctaatgaagag
ccgggagattcgcagcagtcaagccagccttcccagcagccttcagtgcagtcagccatt
ccccagacccagctaatgctggctggggggcagataactgggctcactttgaccccagcc
cagcagcagttgttactacagcaggcacaggcacaggcccagctcctggctgctgcagtg
caacagcactccgccagccaacagcacagtgctgctggggccaccatctcagcctccgct
gccacacccatgacgcagatccccctgtctcagcccatacagattgcacaggatcttcaa
caattgcaacagcttcagcagcaaaatctcaacttacaacagttcgtgttggtgcaccca
accaccaacttgcaaccagcacagtttatcatctcacagaccccccagggccagcagggt
ctcctgcaagcgcaaaatcttttaacgcaactacctcagcaaagccaagccaacctccta
cagccacagccaagcatcaccctcacatcccagcctaccaccccaactcgcacaatagcg
gcaaccccaattcagacacttccacagagccagacaacaccaaagagaattgatactccc
agcttggaggagcccagtgaccttgaggagcttgagcagtttgccaagactttcaaacaa
agacgaatcaaacttggattcactcagggtgatgttgggctcgctatggggaaattatat
ggaaatgacttcagccaaaccaccatctcccgctttgaagccttgaacctcagctttaag
aatatgtgcaagttaaagcccctgttagagaagtggctaaatgacgcagagaatctctca
tctgattctacagcatctagcccaagtgctttgaattctccagggttgggggctgagggc
ttgaatcgtagaagaaaaaaacgcaccagcatagagaccaacatccgtgtggccttagag
aagagtttcatggagaatcaaaagcctacctcggaagatatcaccttgattgctgaacag
ctcaatatggaaaaggaggtgattcgtgtttggttttgtaaccgccgccagaaggagaaa
agaatcaacccaccaagcagtggtgggaccagcaactcacctatcaaagcaattttcccc
agcccaacctcactggtggcaaccactccaagccttgtgacaagcagtacagcaactacc
ctcacagtcaaccctgtcctccccttaaccagtgctgccgtgactaatctctctcttgca
gatcaagggctagatcttagaagaggatgcagctgggaaatgcttaggagtccaccagac
ggagtcaccaccacagcaggcactacagactccacgtccaacagcacggccaccgtgatt
tccacagcacctcccgcttcctcagcagtcacatccccctccctgagtccctctccttct
gcctcagcctccacctctgaggcctctagtgccagtgagaccagcacagcacataccacc
tccacgcctcttccctcccctctcggaaccagccaggtaatggtgacagcatccggctta
cagacagccgccgctgctctccaaggagctgcccagttgccagcaaatgccagtcttgct
gctatggccgctgctgcaggactcaacccaggcctgatggcaccctcacagtttgctgct
ggaggtgccttactcagcctcaacccggggactttgggtggcgcgctcagcccagccctg
atgagcaacagcacactggcaacgattcaagctctcgcttctagtggctctcttccaata
acgtctctggatgcaactgggaacctggtatttgccaatgcaggaggagccccgaacatc
gtgactgcccctctgttcctgaaccctcaaaacctctctctgctcaccagcaacccagta
agcttggtttctgccgctgcagcctccacagggaactccgcacctacagccagccttcat
gcctcctccacctcaactgagtccatccagaactctctgttcacagtcgcctctgccagc
ggggcggcttccaccaccacagctgcctccaaggcacagtga
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