Arvicanthis niloticus (African grass rat): 117716339
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Entry
117716339 CDS
T08817
Symbol
Cdh7
Name
(RefSeq) cadherin-7 isoform X1
KO
K06799
cadherin 7, type 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117716339 (Cdh7)
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Major cadherins
117716339 (Cdh7)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Stevor
Motif
Other DBs
NCBI-GeneID:
117716339
NCBI-ProteinID:
XP_034369273
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Position
10:complement(70517578..70662818)
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AA seq
869 aa
AA seq
DB search
MQTPWFQVPDAAGRLTRPQEPITPFLGNGYSALVTSSSPTLYKLLSLDSQLTHCRRQELR
SQLELCLFSCLSFFLTQEKGRKKKMKLGKVELCHFLQLIALFLCFSGMNQAELPKSRSKP
YFQSGRSRTKRSWVWNQFFVLEEYMGSDPLYVGKLHSDVDKGDGSIKYILSGEGASSIFI
IDENTGDIHATKRLDREEQAYYTLRAQALDRLTNKPVEPESEFVIKIQDINDNEPKFLDG
PYTAGVPEMSPVGTSVVQVTATDADDPTYGNSARVVYSILQGQPYFSVEPKTGVIKTALP
NMDREAKDQYLLVIQAKDMVGQNGGLSGTTSVTVTLTDVNDNPPRFPRRSYQYNVPESLP
VASVVARIKAADADIGVNAEMEYKIVDGDGLGIFKISADKDTQEGIITIQKELDFEAKTS
YTLRIEAANRDADPRFLSLGPFSDTTTVKIIVEDVDEPPVFSSPLYPMEVSEATQVGHII
GTVAAHDPDSSNSPVRYSIDRNTDLERYFNIDANSGVITTAKSLDRETNAVHNITVLAME
SQNPSQVGRGYVAITILDINDNAPEFAMDYETTVCENAQPGQVIQKISAVDKDEPSNGHQ
FYFSLTTDMTNNHNFSLRDNKDNTASILTRRNGFRRQEQSVYYLPIFIVDSGSPSLSSTN
TLTIRVCDCDTDGIAQTCNAEAYILPAGLSTGALIAILACVLTLLVLILLIVTMRRRKKE
PLIFDEERDIRENIVRYDDEGGGEEDTEAFDMAALRNLNVIRDTKTRRDVTPEIQFLSRP
TFKNIPDNVIFREFIWERLKEADVDPGAPPYDSLQTYAFEGNGSVAESLSSLDSISSNSD
QNYDYLSDWGPRFKRLAEMYGNGQESLYS
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgccgtggtttcaggtgcctgatgctgctggcaggctaacgaggccccaggaa
cctattacgccattccttggcaacggctactcagcactggtgacctcttccagcccaaca
ctctacaaattattatctctggactcccagctgacacactgccggaggcaagagctacga
agccaactagaactgtgccttttctcttgtctaagtttttttcttacacaggaaaaagga
agaaaaaaaaagatgaagctgggcaaagtggagttgtgtcattttctccagcttatagct
ctcttcctgtgcttctctgggatgaatcaagctgagctaccgaagtccagatccaagcca
tacttccagtcaggaaggtcccggaccaagcgcagctgggtttggaatcagttcttcgtg
ctggaagaatacatgggttcagatcccctctatgtagggaagcttcactctgatgttgat
aaaggagatggttccatcaaatacatcttgtcaggcgaaggggcaagttcaatttttatt
attgatgagaacactggtgatatccatgctaccaagagactggaccgggaggagcaggcc
tattacaccctcagagcccaagctctggacagactcaccaacaagcctgtggagcctgag
tcagagtttgttatcaagattcaggatatcaatgacaatgaacccaaatttctagatggc
ccatacacagcaggagttcctgagatgtctcctgtggggacttcagtggtacaagtgaca
gcgacagatgccgatgatccaacctatggcaacagtgctcgagtggtctatagtattctg
caaggacagccatacttctcagtggaaccaaaaacaggagtcatcaagactgcccttcca
aacatggatagagaggctaaagaccagtatttgcttgtcattcaggcaaaggatatggtt
gggcaaaatggtggactgtctggaaccacctcagttactgtgaccctaactgatgtcaat
gataacccacctcgctttccacgaagatcttaccagtataatgttccagaatctttgcct
gtggcatcagttgtggccagaattaaagctgcagatgcagatattggagtcaatgcagaa
atggaatacaaaatagtggatggtgatggactgggcattttcaagatatctgctgacaaa
gacacacaggaaggaatcattacaatacaaaaggaactcgatttcgaagccaaaacaagt
tatacactgcgcatagaagctgcaaatcgagatgctgatccccgatttctgagcttgggt
ccattcagtgacacaacaacggttaagataattgtggaagacgtggatgagcctcctgtt
ttttcttcacccttgtaccccatggaggtgtcagaagcgacacaggtggggcatatcatt
ggcactgtagcagctcatgacccagattcttccaacagccctgtgagatattcaattgac
agaaacacagacttggagagatatttcaatattgatgccaacagtggagttattactact
gccaaatcattggatagagagacaaatgctgttcataacattacagtcctcgcaatggaa
agccagaatccatcccaggtggggagaggctatgtggctatcactatactggatattaat
gacaacgcgccagagtttgccatggactatgaaaccactgtctgtgaaaatgctcagcca
gggcaggttatccagaaaatcagtgcagtagataaagatgagccatccaacggacaccag
ttttacttcagcttaacaacagatatgacaaataaccacaacttttcattgagagataac
aaagacaatacagcctccattctcaccaggagaaatggcttccgcagacaggagcaatcg
gtttattatctgccaattttcattgtggacagtggatctccttcactgagcagtaccaac
acacttaccatccgtgtatgtgactgtgacactgatggcatagctcagacctgcaatgca
gaggcttatattctacctgctggtctcagtactggggctttaatagcaatactggcctgt
gtcctgacactcttggtgctgatcctcctcattgtcactatgagaagacgaaaaaaagaa
cctctcatttttgatgaggagagggatattagagaaaacatcgtcagatatgatgatgag
ggcgggggagaagaagacacagaagcctttgacatggctgcgctgagaaacctcaacgtc
ataagagacaccaaaactcggagagatgtgactcctgaaattcagtttttgagccgaccg
acttttaaaaacatcccagataatgtcatttttagggaatttatttgggaaagactgaaa
gaagctgatgtggatccaggggctcctccatatgactctcttcagacttatgcatttgaa
ggaaatggctcagtagctgaatctctcagttctttagattccatcagctcaaactctgat
cagaattatgactaccttagtgactggggtccccgttttaaacgactggctgaaatgtac
ggaaatggccaagagagtttgtactcatag
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