Arvicanthis niloticus (African grass rat): 117716492
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Entry
117716492 CDS
T08817
Symbol
Cdh20
Name
(RefSeq) cadherin-20
KO
K06807
cadherin 20, type 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117716492 (Cdh20)
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Major cadherins
117716492 (Cdh20)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_2
Cadherin_4
TAS2R
Wzy_C
Motif
Other DBs
NCBI-GeneID:
117716492
NCBI-ProteinID:
XP_034369426
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All DBs
Position
10:complement(75015931..75247062)
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AA seq
801 aa
AA seq
DB search
MWTTGRMSNAKSWLGLGASFYFWALMDLTTTVLSSTPTPEVELKTFFSERPQSHQRSKRS
WVWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQ
RLDREERAQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYVATVPEMSPV
GTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSKTGVIRTALMNMDREAKEYYEV
IIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQMSVLESAPVSSTVGRVFAKD
LDEGINAEMKYTIVDGDGADAFDINTDPNFQVGIITVKKPLSFESKKSYTLKVEGSNPHL
EMRFMNLGPFQDTTTVHISVEDVDEPPVFEPGFYFVEVPEDVTIGTTIQIISAKDPDVTN
NSIRYSIDRDSDPGRFFYVDITTGALMTARPLDREEFSWHNITVLAMEMNNPSQVGSVAV
TIKVLDVNDNAPEFPRFYEAFICENAKAGQLIQTVSAVDHDDPHNGQHFYYSLAPEAANN
PNFTVRDNQDNTARILTRRSGFRQQEQSVFYLPILIADGGQPVLSSTGTLTIQVCSCNDD
GHVMSCSPEAYMLPVSLSRGALIAILACIFVLLVLVLLILSMRRHRKQPYIIDDDENIHE
NIVRYDDEGGGEEDTEAFDIAAMWNPREAQAGAAPKTRQDMLPEIESLSRYVPQTCAVSS
TVHSYVLAKLYEADMDLWAPPFDSLQTYMFEGDGSVAGSLSSLQSATSDSEQNFDFLTDW
GPRFRKLAELYGASEGPAPLW
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtggactacgggtaggatgagcaatgcgaagagttggcttggacttggcgcatccttc
tacttctgggcactgatggaccttaccaccaccgttctctccagcactccaacgccagaa
gttgaattaaagacattcttctcagaaagaccacagtcacatcagcgaagcaagaggagc
tgggtttggaatcagttttttgtcctggaagagtacactgggactgaccctttgtatgtc
ggcaagcttcattcagacatggacaggggagatggatctatcaaatacatcctttcagga
gaaggagcaggcatcgtatttaccatcgatgataccactggagacatccatgccattcag
aggctcgaccgagaggaaagagcccaatatactctaagggctcaagccctagacaggaga
acaggccggccaatggagccagaatcagagttcattatcaaaatccaagatatcaatgac
aacgagcccaaattcctggatggaccttacgttgccactgtgccagaaatgtcaccagta
ggtacttctgttatccaagtgacagccacagatgctgatgacccaacctatggcaacagt
gcccgggtagtttacagcattctccagggccagccatatttttctgtggactccaaaaca
ggtgtaatcagaacagcactcatgaacatggacagggaagccaaggaatactacgaagtg
attatccaagccaaggatatgggagggcaacttggaggattggctgggaccacaacagtc
aacatcaccctctcagatgtcaatgataacccaccccgatttccacagaaacattatcaa
atgagtgtgctagaatctgctccagttagctccactgtggggagagtgtttgccaaggac
ctggatgaaggcatcaatgcagagatgaagtacaccattgtggatggagatggtgcagat
gcttttgatattaatacagacccaaacttccaagttggcatcataactgtgaagaagccc
ctgagttttgaaagcaagaaaagctacaccctgaaggtggaaggatccaatcctcaccta
gagatgcgttttatgaaccttggcccatttcaggacaccacaacagtgcatatcagcgtg
gaggatgtggacgagcctcctgtgtttgaaccaggcttttattttgtggaggtgccagag
gatgtgacaattggaacaaccatacagatcatttccgccaaggacccagatgtgaccaac
aactcaatcagatactccattgacagagacagcgacccgggaagatttttctatgttgac
attacaacaggtgctctaatgaccgcaagaccactagacagagaagagttttcctggcat
aatataactgttcttgctatggaaatgaacaatccctcccaagtgggaagtgttgctgtc
acaatcaaagtcctcgatgtgaatgacaatgctccagagtttcccagattctatgaagct
tttatctgtgaaaatgccaaagcaggacagctgatccagacagtgagcgccgtggatcac
gatgaccctcacaacggtcaacacttctactacagtttggctcctgaggctgctaacaac
cccaacttcactgtcagggacaaccaagataatactgctcggattctgaccaggaggtca
ggcttccgacagcaggagcagagtgtcttctatctgcccatcctcatagcagacggcggc
cagccagtcctcagcagcaccgggacgcttaccattcaagtgtgcagctgcaatgacgac
ggtcatgtcatgtcctgcagccccgaggcctatatgctccctgtcagtttgagtcgaggt
gccctcatcgccatcctggcctgcatctttgtcctcttagtgttggtactgctcatcctg
tccatgaggcgacaccggaaacaaccctacatcatcgacgacgatgagaacatccacgag
aacatcgtgcgctacgatgacgaggggggaggcgaggaggacacagaggccttcgacatc
gctgccatgtggaacccgcgcgaggcgcaggcaggcgccgcccccaagacgcgccaggac
atgctccccgagatcgagagcctctcccgctacgtgcctcagacctgcgcggtcagcagc
acggtccacagctacgtgctggccaagctctacgaggccgacatggacctgtgggccccg
cccttcgactccctgcagacctacatgtttgagggggacggctcggtggccggctcgctc
agctccctgcagtcagccacctcggactccgagcagaactttgatttcctcacggactgg
ggaccccgattccggaaactagcagaactctacggggcatcagaagggccggcgcccttg
tggtga
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