Arvicanthis niloticus (African grass rat): 117716560
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Entry
117716560 CDS
T08817
Symbol
Mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117716560 (Mms19)
03400 DNA repair and recombination proteins [BR:
anu03400
]
117716560 (Mms19)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117716560 (Mms19)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
117716560 (Mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
HEAT_2
TOR1L1_N
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
117716560
NCBI-ProteinID:
XP_034369517
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All DBs
Position
1:complement(148418692..148453280)
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AA seq
1031 aa
AA seq
DB search
MAATTALGEAAAPMGALCGLVQDFVMGQQEGPADQVAADVKSGGYTVLQVVEALGSSLEN
PEPRTRARGIQLLSQVLLQCHSLLLEKEVVHLILFYENRLKDHHLVIPSVLQGLRALSLS
VALPPGLAVSVLKAIFQEVHVQSLLQVDRHTVFSIITNFMRSREEELKGLGADFTFGFIQ
VMDGEKDPRNLLLAFRIVHDLISKDYSLGPFVEELFEVTSCYFPIDFTPPPNDPYGIQRE
DLILSLRAVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKELKDFLP
SLWASIRREVFQTASDRVEAEGLAALHSLTACLSCSVLRADAEDLLDSFLSNVLQDCRHH
LCEPDMKLVWPSAKLLQAAAGASARACEHITSNVLPLLLEQFHKHSQSNQRRTILEMILG
FLKLQQKWSYEDRDERPLRSFKDQLCSLVFMALTDSSTQLQLVGIRTLTVLGAQPDLLSA
EDLELAVGHLYRLGFLEEDSQSCRVTALEASGTLATLYPVAFSIHLLPKLAEELRKGESD
VARADGPTKCSRHFRCLQALSAVSTHPSIVTETLPLLLQHLCQANKGNIMIESSEVVAVC
QSLQQVAEKCQQDPESYWYFHKTAVPCLFALAVQASMPEKESSVLRKVLLEDEVLAALAS
VIGTATTHLTPELAAQSVTCIVPLFLDGNTSFLPENSFPGQFQPFQDGSSGQRRLVALLT
AFVCSLPRDVEIPQLNRLMRELLEQSCGHSCPFSSTAATKCFAGLLNKQPPGQQLDEFLQ
LAVDTVEAGLASESSRNQAFTLLLWVTKALVLRYHPLSACLTTRLMGLLSDPELGCAAAD
GFSLLMSDCTDVLTRAGHADVRIMFRQRFFTDNVPALVQGFHAAPQDVKPNYLKGLSHVL
NRLPKPVLLPELPTLLSLLLEALSCPDSVVQLSTLSCLQPLLLEAPQIMSLHVDTLVTKF
LNLSSSYSMAVRIAALQCMHALTRLPTSVLLPHKPQVIRALAKPLDDKKRLVRKEAVLAR
GEWFLLGSPGS
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggctgccactactgctctcggggaggcagcggcgcctatgggtgccctgtgtggcctc
gtgcaagacttcgtcatgggtcagcaggaggggcccgctgaccaggtggctgcagatgtg
aagtctggtggctatacagtgttacaagtagtagaagcccttgggtcctctctggagaat
ccagaaccccgaactcgggctcgaggaatccagcttttgtcacaggtgctactccagtgt
cactccttgctcttggagaaggaagtggtccacctgattctgttctatgagaaccgactg
aaggaccatcatcttgtgatcccatctgtcctacagggcctgagggcactgagcctgtct
gtggccctgcccccaggcctggctgtctctgtgcttaaagccatcttccaggaggtacat
gtacagtccctgctacaggtggaccgccatactgtcttcagtatcatcactaatttcatg
cgatcacgagaagaagaactgaagggcctaggagctgacttcacatttggcttcatccag
gtgatggatggagagaaggacccccgtaatctgttgttggctttccgcatcgtccatgac
ctcatctccaaggactacagtctaggaccttttgtggaagagttatttgaagtgacgtct
tgttatttccctattgattttacccctccacctaatgatccttatggcatccagagagaa
gatctcatcctgagtctccgtgctgtgctggcttctacaccgcgttttgctgagttctta
ctgcctctgctaattgagaaagtggattctgagattttaagtgccaagctggattctctg
caaactctgaatgcttgctgtgctgtgtatggacagaaggagctaaaggacttcctcccc
agcctttgggcttccatccgcagagaggttttccagacggcaagtgatcgagtagaagca
gagggcctggcagctctccattccctgactgcgtgtctgtcttgctctgtgctaagagct
gatgctgaggacctcctcgactccttcctcagcaacgttctacaagactgcaggcaccat
ctatgtgaaccagacatgaaacttgtatggcctagtgctaagctgttgcaggcagctgca
ggtgcgtctgcccgggcctgtgagcacatcaccagcaacgtgcttcccttgctgctggaa
cagttccacaagcacagccagagcaaccagcgtcggacaatccttgaaatgatcctggga
ttcttaaagctacagcagaaatggagctatgaagacagagatgaaaggcctctgaggagc
ttcaaagaccagctgtgctcattggtgttcatggctctaacagactccagcacccagctt
cagcttgttggcatccggacactcacagtcttgggtgcccagccagatctcctgtctgct
gaggacttggagttggcagtaggtcacctgtaccgactgggcttcctggaagaagattcc
cagagctgtagggtgacagcactggaggcatcaggaaccctggccactctctatcctgta
gccttcagcatccacttgctacccaagcttgctgaggagctgcgtaaaggggagtcagat
gtggctagagcggatggtcccaccaaatgttcccggcatttccgctgtctgcaagctttg
tcggctgtttcaacacatcccagcattgttacagagacactgcctctgctactgcagcat
ctctgtcaggcaaacaaagggaatataatgatagagtccagtgaagttgttgctgtctgt
cagagtctccagcaggtggcagaaaaatgccagcaggaccctgagagctactggtatttc
cacaagacagctgtaccctgcctgtttgcactggctgtgcaggcttcaatgccagagaag
gaatcttcagttctgagaaaagtgctattggaggatgaggtcttggctgcgttggcatct
gtcattggcactgccactacccatctgacccctgaactagctgcccagagcgtcacctgc
atcgtgccactcttcttagatggcaacacttcctttctacctgaaaacagcttcccaggc
cagttccagccattccaggatggctcctctgggcagaggcggctggttgcactacttaca
gctttcgtctgctccctgccacgagatgtggaaatccctcagctgaaccgactcatgcgg
gagcttttggagcagagctgtggccacagctgtcccttctcctccactgctgccaccaag
tgcttcgcaggcctcctcaacaagcagcctccagggcagcagttggatgagttcctccag
cttgctgtggacacagtggaggcgggcctggcctctgaatcctcccgtaatcaggcgttc
acactgctactctgggtaaccaaggctctagtcctcagataccatcctctcagtgcctgc
ctgactacccggctcatgggcctcctcagtgatccagagctaggctgtgcagcagctgat
ggcttctctctgctcatgtctgactgcactgatgtgctgactcgtgccggccatgctgat
gttcggatcatgttccgccagcggttcttcactgacaacgtgcctgctttggtccaaggt
ttccatgccgctccccaagatgtgaagccaaactatctaaagggtctgtctcatgtactc
aacaggctgcccaagcctgtgcttttaccagagctgcccacactcctttccttgctgctg
gaggcactgtcctgccctgactctgtggtccagctttccactctgagctgtctccaaccc
ctactactggaagcgccccaaatcatgagtcttcatgttgatactctggttacgaaattc
ctgaacctcagctccagttattcaatggctgttcggattgctgctctgcagtgtatgcac
gctctcactcgcctacccacttctgtgctactgccgcacaaacctcaggtgatccgagcc
ttagccaagcctctggacgacaagaagagacttgtgcgcaaggaagcagtgttagcgagg
ggagaatggttcctactagggagcccagggagctga
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