Arvicanthis niloticus (African grass rat): 117716730
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Entry
117716730 CDS
T08817
Symbol
Psma6
Name
(RefSeq) proteasome subunit alpha type-6
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03050
Proteasome
anu05010
Alzheimer disease
anu05012
Parkinson disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05017
Spinocerebellar ataxia
anu05020
Prion disease
anu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
117716730 (Psma6)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
117716730 (Psma6)
05012 Parkinson disease
117716730 (Psma6)
05014 Amyotrophic lateral sclerosis
117716730 (Psma6)
05016 Huntington disease
117716730 (Psma6)
05017 Spinocerebellar ataxia
117716730 (Psma6)
05020 Prion disease
117716730 (Psma6)
05022 Pathways of neurodegeneration - multiple diseases
117716730 (Psma6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
117716730 (Psma6)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
anu03051
]
117716730 (Psma6)
Enzymes [BR:
anu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
117716730 (Psma6)
Peptidases and inhibitors [BR:
anu01002
]
Threonine peptidases
Family T1: proteasome family
117716730 (Psma6)
Proteasome [BR:
anu03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
117716730 (Psma6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
117716730
NCBI-ProteinID:
XP_034369627
LinkDB
All DBs
Position
11:complement(13434962..13451335)
Genome browser
AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE
KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV
ALAERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtggttccagcgccggttttgaccgccacattactattttctctcccgagggc
cgactctaccaagtagaatatgcttttaaggctattaaccagggtggacttacatctgtt
gctgttagaggaaaggactgcgcagttattgtcacacagaagaaagtacccgacaaacta
ctggattctagcacagtgactcacttattcaagataacggaaaacatcggctgtgtgatg
acaggaatgacagctgacagcagatcccaggtacagagggcacgctatgaggcagctaat
tggaaatacaaatacggctatgagattcctgtggatatgctgtgtaaaagaattgctgat
atttctcaagtttacacacagaatgctgaaatgaggccgcttggttgttgtatgatttta
attggtattgatgaagaacaaggcccacaggtgtacaagtgtgaccctgcaggctactac
tgtggctttaaagccactgcagcaggagttaaacaaacagagtcaaccagcttccttgaa
aaaaaagtgaagaagaaatttgattggacatttgaacagacagtggaaactgcaattaca
tgcctgtctactgttctgtcgattgatttcaaaccttcagaaatagaagttggagtagtt
acagttgaaaatcctaaattcaggattcttacagaagcagagattgacgctcaccttgtt
gccctagcagagagagactga
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