Arvicanthis niloticus (African grass rat): 117716804
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Entry
117716804 CDS
T08817
Symbol
Snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
anu04990
]
117716804 (Snx13)
Domain-containing proteins not elsewhere classified [BR:
anu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117716804 (Snx13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
COX5A
Rep3_C
Motif
Other DBs
NCBI-GeneID:
117716804
NCBI-ProteinID:
XP_034369756
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All DBs
Position
11:complement(31384391..31480157)
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AA seq
969 aa
AA seq
DB search
MMLTEASLSIWGWGSLGIVLFLITFGPFVIFYLAFYILCFVGGGLVVTLLYGKTNSEKYL
EQCEHSFLPPTSSGVPKCLEEMKREARTIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYW
YYTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQPYFTTRIVDDFGTHLRVFRKAQQKV
TEKDDQVKGTAEDLVETFFEVEVEMEKDVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPG
DFQSKIMRYFVREILARGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDN
IGELEAVRDKAAEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCDSRIQRLQSGKEINT
VKLAANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEV
LSSRQRDGKQQTNQTKGLLRAAAVGIYEQYLSEKASPRVIVDDYLVAKLADTLNHEDPTP
EIFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSP
TGSINLSLDDLSSVTSDDSVQLHAYISDTVYADYDPYAVAGVCNDHGKTYALYAITVHRR
NLNTEEMWKTYRRYSDFHDFHMRITEQFENLSSILKLPGKKTFNNMDRDFLEKRKKDLNA
YLQLLLAPEMMKASPALAHCVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVK
SLPDSLAEGVTKMSDNVGRMSERLGQDIKQSFFKVPPLITKTDSDPEHCRVSAQLDDNVD
DNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPE
QVADSVKRFRDAFWPNGILAETVPCRDKAIRMRTRIAGKTKLFAIMPDELKHIIGAETTR
KGILRVFEMFQHNQLNRRMVYVFLEGFLETLFPQYKFRELFNKLHSRSKQMQKYKQKLQS
TQAPSLQKR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaacagaggccagtctatccatatggggatggggaagccttggcattgtcctt
tttctaataacctttggaccctttgtaatattttatttggcattttatatcctctgcttt
gtgggagggggtttagtggttactcttctgtatgggaaaactaactcagaaaaataccta
gagcagtgtgaacactcatttcttcctccaacatcatctggggttcctaagtgcttagaa
gaaatgaaacgagaagccaggactattaagattgacagaagattgacgggtgccaatata
attgatgagcctctccagcaagttatccagttttccttgagggattatgtccagtactgg
tattacacattaagcgatgacgagtcatttcttctggaaattaggcaaactctgcagaat
gcactcattcagtttgctactaggtcaaaagaaatcgactggcagccttattttactaca
cgcattgtagatgattttggcactcacctacgagtattcagaaaggctcaacagaaagta
acagagaaagatgatcaagtcaaaggtacagcagaagatctggtagaaaccttttttgaa
gttgaagttgaaatggagaaggatgtttgccgagatctagtgtgcacttctcccaaagat
gaagaaggattcctaagggatttgtgtgaggttttattatatttattgctacctcctgga
gatttccagagcaagatcatgcgatactttgtcagggaaatccttgcacgaggaattctt
cttccattaataaatcaactcagtgatcctgattatattaatcaatatgtcatatggatg
atccgtgattcaaattgcaactatgaggcctttatgaacattattaaattaagtgacaat
attggagagttagaagcagtcagagataaggcggcagaagagctacagtaccttagatct
ttagatacagccggtgatgatattaacactatcaaaaatcaaataaatagcttattattt
gtaaagaaagtatgtgactcaagaatacagcggttacagtcaggcaaagaaataaatact
gtgaagctagcagcaaactttgggaaactttgtacagtccccttggacagcattcttgta
gataacgttgcactacaattttttatggattatatgcagcaaactggaggccaagcacat
ctcttcttttggatgacagtggaagggtaccgggtcacagcccagcagcagctagaggtt
ctctctagtcgtcagagagatggcaaacagcagactaaccaaaccaaaggtcttttaaga
gcagcagctgttggaatttatgaacagtatttatctgaaaaggcatctccaagagttatt
gttgatgactatttagtagcaaaattagcagatactttgaatcatgaagatccaactcca
gaaatctttgatgacatacaaagaaaggtatatgaattgatgctacgagatgaaagattt
tatccttccttcaggcagaatgcgctttatgtgcggatgctagctgagcttgatatgtta
aaagatcctagtttcagaggatcagatgatggggacggagaatcttttaatggatctcct
acaggaagcataaatttgtctttagatgacctttcaagtgtgacttctgatgattctgta
caacttcatgcctacatttcagacactgtatatgctgactatgacccatatgctgtggca
ggcgtttgtaatgatcatggcaagacatatgcactatatgccatcactgtacaccggcgc
aacctcaacactgaggagatgtggaaaacctatcggcgttatagtgacttccatgacttc
cacatgagaatcactgagcagtttgaaaatctgtcaagcatattgaagcttcctggtaaa
aagacttttaacaatatggatagagatttcttagaaaagaggaaaaaggatttaaatgcc
tatttgcagttactcttggctcctgaaatgatgaaggcatccccggcgttggcccactgt
gtctatgatttccttgagaacaaagcctacagtaaagggaagggtgattttgctcgaaag
atggacacttttgtaaatccgcttcgcaactctatgaggaacgtttcaaatgcagtcaaa
tcccttcctgatagcttggcagaaggagtgacaaaaatgtcggacaacgtgggcagaatg
tcagagagattagggcaagacataaagcagtcattttttaaggtacctcctttaattacg
aagactgattcagatcctgaacattgtcgagtctcagctcagcttgatgataatgtggat
gacaatattccacttagggtaatgctgcttctaatggatgaggtgttcgacttaaaagag
agaaaccagtggttgagaaggaatatcaagaatttactccagcaacttattagagctaca
tatggtgatactattaacagaaaaatagttgaccatgttgactggatgacctcaccggaa
caagtagctgactcggtgaagcgtttcagagatgcattttggcccaatggcattttagca
gagacagttccatgcagagataaggctattcgaatgagaacaagaattgcaggaaaaaca
aaattatttgcaattatgccagatgaactgaagcacattattggagctgagacaacacgg
aaaggtattcttcgtgtttttgaaatgtttcagcacaaccaactaaataggagaatggtg
tatgtcttcttagaaggctttttagaaaccttatttccacaatataaatttcgtgaactt
ttcaacaaacttcattcaaggtcaaagcaaatgcagaaatataagcaaaaacttcaaagt
actcaagcgccttctttacaaaaaaggtga
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