Arvicanthis niloticus (African grass rat): 117716820
Help
Entry
117716820 CDS
T08817
Symbol
Six3
Name
(RefSeq) homeobox protein SIX3 isoform X1
KO
K19473
homeobox protein SIX3/6
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117716820 (Six3)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
117716820 (Six3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_3
Motif
Other DBs
NCBI-GeneID:
117716820
NCBI-ProteinID:
XP_034369786
LinkDB
All DBs
Position
11:70919231..70934548
Genome browser
AA seq
391 aa
AA seq
DB search
MRRWVRMRWRWSWGCIAGHQLFTLLWRGQSMVFRSPLDLYSSHFLLPNFADSHHCSLLLA
SSGGGSGAGGGGGAGGGGGGGGGGGGNRAGGGGAGGAGGGGGGGGGGGGSRAPPEELSMF
QLPTLNFSPEQVASVCETLEETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAF
HTGNFRDLYHILENHKFTKESHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLP
RTIWDGEQKTHCFKERTRSLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQR
DRAAAAKNRLQHQAIGPSGMRSLAEPGCPTHGSAESPSTAASPTTSVSSLTERADTGTSI
LSDKHGFSFWFPRTRHPTCMTIYLYLGKYSL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagatgggtgagaatgaggtggagatggagttggggttgcatcgcagggcaccaa
ctattcacccttctatggagaggtcagtccatggtattccgctcccccctagacctctat
tcctcccacttcttgttgccaaacttcgccgattcccaccactgctccctacttctggcg
agtagcggcggcgggagcggtgcgggcggcggcggcggcgcgggaggaggaggaggcggc
ggcggcggcggcggcgggaaccgtgcgggaggcggcggtgctggcggagcaggcggcggc
ggcggcggcggcggcggcggcggcggctccagggcccccccggaagagttgtccatgttc
cagctgcccaccctcaacttctcgccggagcaggtggccagcgtctgcgagacgctggag
gagacgggcgacatcgagcggctgggccgcttcctctggtcgctgcccgtggcccccggg
gcgtgcgaggccatcaacaaacacgagtcgatcctgcgcgcgcgcgcggtcgtcgccttc
cacaccggcaacttccgcgacctgtaccacatcctggagaaccataagttcaccaaggag
tctcacggcaagctgcaggccatgtggctcgaggcgcactaccaggaggccgagaagctg
cgcggccgcccgctcggtccggtggacaagtaccgcgtgcgcaagaagttccctctgccg
cgcaccatctgggacggcgagcagaagacccattgcttcaaggagcggactcggagcctg
ctgcgggagtggtatctgcaggatccctaccccaaccccagcaagaaacgcgaactggcg
caggccaccggcctcacccccacacaagtaggcaactggtttaagaaccggcgacagcgc
gaccgcgcagcggcggctaagaacaggctccagcaccaggccatcgggccgagcgggatg
cgctcgttggctgagcccggctgccccacacacggctcagcagagtcaccgtccacggcg
gccagcccgaccaccagtgtgtccagcctgaccgagcgcgcggacaccggcacttcgatc
ctctcggacaagcacggcttctccttttggttcccacggacccggcaccccacctgcatg
acgatttatttgtatctgggaaaatattctctctag
DBGET
integrated database retrieval system
