Arvicanthis niloticus (African grass rat): 117716882
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Entry
117716882 CDS
T08817
Symbol
Gtf3c2
Name
(RefSeq) general transcription factor 3C polypeptide 2 isoform X1
KO
K15200
general transcription factor 3C polypeptide 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117716882 (Gtf3c2)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
117716882 (Gtf3c2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR5
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
WD40_Prp19
ASA1
DSE1_N
Beta-prop_VPS8
WDR55
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
117716882
NCBI-ProteinID:
XP_034369848
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All DBs
Position
11:54360009..54381083
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AA seq
951 aa
AA seq
DB search
MDACGVGYVALGEADPVGSMIVVDSPGQEDLSQLDVKASSEMSSVEASIEMSLPPPLPGF
EDSSDKRRLPPDQENLTRLEQQDLSSEMAKVSNPRASKPSGRRGGRTPRGAKRPQQRKPP
STPLVPGLLDQSNPLSTPMPKKRSQKSKGDLLLLKLSKGLDQPESPHPKRPPEDFETPSG
ERPRRRAAQVVSLPNPGWPRTCDPPTSASRVLGLQACATTPGSPSHFSQTSPRALLYLQE
LAEELSTALPAPLTGPKSPKVSSPTKPKKIRQAASQGEEDGSARDEDFVLQVEGEDEEES
EAPSENSSDPEPVAPRSTPRGPAAGKQKPHCRGMAPNGLPNYIMAPVWKCLHLTKDLREQ
QHSFWEFAEWIPVAWKWQLLSEVEAAPYLPQEEKSPLFSVQREGIPEDGTIYRINRFSSI
TAHPERWDVSFFTGGPLWALDWCPVPEGSAASQYVALFSSPDMNETHPLSQLHSGPGLLQ
LWGLGTLQQESCPGNRAHFVYGIACDSGCIWDLKFCPSGAWEHPETLRKAPLLPRLGLLA
LACSDGKVLLFSLPHPEALLAQQPPDAMKPAIYKVQCLATLQVGSVQASDPSECGQCLSL
AWMPTRPHHHLAAGYYNGMVVFWNLPTNSPLQRIRLSDGSLKLYPFQCFLAHDQAVRTIQ
WCKANSHFLVSAGSDRKIKFWDLRRPYEPINCIKRFLSTELSWLLPYNGVTVAQDNCYAS
YGLCGIHYIDAGYLGFKAYFTAPRKGTVWSLSGSDWLGTVAAGDISGELIAAILPDMASN
PINVKKPAERRFPIYKADLIPYQDSPEDQDYSSTSSETPNPPKARTYTETINHHYLLFQD
TDLSSFHNLLRREPMLRMQEGEGHSQLCLDRLQLEAIHKVRFSPNLDSYGWLVSGGQSGL
VRIHFVRGLTSPLAHRVQLESRANFNAMFQPSFPTEGPGFSPSSHCLLPNP
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggatgcctgcggggtcggctatgttgccctgggggaggccgaccccgtggggagcatg
attgtggtagactctcctggacaagaagacctaagccagctggatgtcaaggcttcctca
gaaatgtccagtgtggaggcttccatcgagatgtcactacctcctcctttgcctggattt
gaggattcttctgacaagaggaggcttcctccagatcaggaaaacctcaccaggttggaa
cagcaagatctttcttcagagatggcaaaggtctcaaaccctagggcctcaaagccttcc
gggaggagaggtggtaggacaccaaggggcgctaaaaggcctcagcaacgtaaacctcca
tccacccctctggttcctggtctcttagatcagtccaaccctctgtccacccccatgcct
aagaaacgaagtcaaaagtccaagggagacctgctactattgaagttgtccaaaggccta
gatcagccagagtctccacatccaaagaggccccccgaggactttgagaccccttctggg
gaacgaccccgccgaagggctgcccaagtggtgtcgctgcccaacccaggttggcctcga
acttgcgatcctcccacctcagcctcccgagtgctgggattgcaggcgtgtgccaccaca
cctggctctccatcacatttttcacagacttcccccagggcacttctataccttcaggaa
ctagctgaagaactctccacagccctgcctgcaccactgactggtcctaagagtcccaag
gtgagcagccccacgaagccgaagaagatccggcaagcagcctctcagggtgaagaagat
ggaagcgctcgagatgaagactttgttctccaggttgagggtgaagatgaggaagaaagt
gaggccccaagtgagaactcatctgatcctgagcctgtcgcaccccgaagcaccccacga
ggacctgctgcagggaaacagaaaccacactgccggggcatggctcccaatggcttaccc
aattacatcatggctcctgtttggaagtgcctccacctcaccaaggacctccgagaacag
cagcattcattctgggagtttgctgaatggattccagtagcctggaagtggcagttgtta
tctgaagttgaagcagcgccctacttgccccaggaggagaagtctcccctgttttctgta
cagcgtgaagggattcctgaggatggcacgatctaccgaataaacagatttagctcgatc
acagcacatccagagcgctgggatgtgtccttcttcacagggggaccgctctgggctctg
gactggtgcccagtgcctgaagggtcagcagcctcacagtatgtggcccttttctccagc
cctgacatgaatgagacacatccactgagtcagcttcattcaggccctgggctgctgcag
ctctggggtcttgggacactgcagcaagaaagctgtcctggcaacagggcccactttgtc
tatgggattgcttgtgacagtggttgtatctgggacctcaagttctgccccagtggggca
tgggaacatccagaaacccttcggaaggctcctctcctgcctcgcctgggtctcttggct
ctggcctgctcagatgggaaggtactactgttcagtctgccgcatcctgaggccctcctg
gctcagcagcccccagatgccatgaagcctgccatctacaaggtccagtgtttggcaact
cttcaggtggggtctgtgcaagcttcagacccctctgagtgtggtcagtgccttagcctg
gcttggatgcctaccaggcctcaccaccacctggctgctggatactataatggcatggta
gttttctggaatcttcccactaactcacccctccaaaggatacggctctctgatggctcc
ttaaagctgtaccccttccagtgtttcctagcccatgaccaggctgttcgtacaattcag
tggtgcaaagctaacagtcatttcctggtatcggcggggagtgatcggaaaatcaaattc
tgggatcttcgacgaccttatgaaccaataaactgtatcaagcgcttcttgagtacagag
ctttcctggctgctcccctacaatggtgtcacagtggcacaagacaactgttatgcctct
tacgggctctgtggaattcattacattgatgccggttaccttggttttaaggcctacttt
actgctccacgaaaaggcactgtctggagtctctcaggttcagactggctcgggacagta
gctgcaggagacatatctggggagcttattgcagcgattttacctgatatggcatcaaac
ccaatcaatgtcaagaaacctgcagaaagacgatttcctatatataaagcagatctgata
ccataccaggacagccccgaagaccaagattactcctctacttcctctgagacccccaat
cctcccaaagcaagaacctacactgaaaccatcaaccaccactacttgctctttcaagat
acagatctgagttccttccacaatctgcttcgtagagagccgatgcttcgtatgcaggaa
ggagagggacattctcagctttgcctggacaggctgcaacttgaagctattcacaaggta
cgtttcagcccaaacctggactcctatggatggctggtatctggggggcagtcagggctg
gttcggatccattttgtccgtggactcacctccccgctggcccaccgtgtacagcttgaa
agccgagccaacttcaatgctatgttccaaccatcgtttccaacagaagggcctggtttc
tctccaagcagccattgccttctccccaatccctag
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integrated database retrieval system
