Arvicanthis niloticus (African grass rat): 117716889
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Entry
117716889 CDS
T08817
Symbol
Nrxn1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117716889 (Nrxn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117716889 (Nrxn1)
Membrane trafficking [BR:
anu04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
117716889 (Nrxn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
117716889
NCBI-ProteinID:
XP_034369862
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All DBs
Position
11:75332519..76402175
Genome browser
AA seq
1513 aa
AA seq
DB search
MGTALVQRGGCCVLCLSLLLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFQLKT
RSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVNDGAWHSVRIR
RQFRNTTLYIDRSEAKWVEVKSKRRDMTVFSGLFVGGLPPELRAAALKLTLASVREREPF
KGWIRDVRVNSSQALPLDGGEVKLDDEPPNSGGGSPCEAGDEGEGGVCLNGGVCSVVDDQ
AVCDCSRTGFRGKDCSQEDNNVEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNP
IQSSSDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNG
KFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSP
STADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAKQGDAKMKIHGVVAFKCENVATLD
PITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDF
FAIEMLDGHLYLLLDMGSGTIKIKALQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTA
PGESEILDLDDDLYLGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMA
EIQSTAGVKPSCSRETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLS
YDGSMFMKIQLPVVMHTEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTV
NLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHT
RLEFHNIETGIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFR
NIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKG
YLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMISRDTSNLHTVKIDTKITTQITAGARNL
DLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGC
EVALMKADLQGPSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKG
GGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKF
NVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGNNDNERLAIAR
QRIPYRLGRVVDEWLLDKGRQLTIFNSQATIIIGGKEQGQPFQGQLSGLYYNGLKVLNMA
AENDANIAIVGNVRLVGEVPSSMTTESTATAMQSEMSTSIMETTTTLATSTARRGKPPTK
EPISQTTDDILVASAECPSDDEDIDPCEPSSANPTRVGGREPYPGSAEVIRESSSTTGMV
VGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISNSAQSNGAVVKEKQPSSAKSA
NKNKKNKDKEYYV
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atggggacggcgctggtccagcgcgggggctgctgcgtcctctgcctgtcgctgctgctg
ctgggctgctgggcagagctgggcagcgggctagagttcccgggcgccgagggccagtgg
acacgcttccccaagtggaacgcgtgctgcgagagcgagatgagcttccagctgaagacg
cgcagtgcccgcggcctcgtgctctacttcgacgacgagggcttctgcgacttcctcgag
ctcatcctgacacgcggcggccgcctgcagctcagcttctccatcttctgcgccgagccc
gccacgctgctggcggacactccggtcaacgacggcgcttggcacagcgtgcgcatccgc
cgacagttccgcaacaccacgctctacatcgaccgctccgaggccaagtgggtggaggtc
aagtcgaagcgccgggacatgaccgtgttcagcgggctcttcgtgggcggcctgccgccc
gaactgcgcgccgcggcgctcaagctcacgctggcctcggtgcgcgagcgcgagcccttc
aagggctggatccgtgatgtcagggtcaactcatctcaggcgctgccgctggacggcggc
gaggtcaagctggacgacgagccgcccaacagcggcggcgggagcccgtgcgaggcgggc
gacgagggcgagggcggtgtgtgcctcaacgggggcgtgtgctccgtggtcgatgaccag
gcggtgtgcgactgctcgaggaccggcttccgcggcaaggactgcagccaagaagacaac
aatgtggaaggtctggcgcacctgatgatgggcgaccaaggtaaaagtaaagggaaagaa
gaatatattgccacattcaagggatctgaatacttctgctacgacctatctcaaaacccc
attcaaagcagcagcgatgaaataactctgtcctttaaaactcttcagaggaacggactg
atgcttcacacagggaaatcagctgattatgtcaatcttgccttgaaaaatggagctgtt
tctctggtcattaatttgggatcaggggcctttgaagcgctagtggagcccgtgaatgga
aagtttaatgataatgcctggcatgatgtgaaagtcaccaggaatctgcgtcagcactca
ggcattggacacgctatggtgacaatatcagtggatgggattcttaccacaacgggctac
acgcaagaagattacaccatgctggggtctgatgactttttctatgttggaggcagcccc
agcacagccgaccttccagggtcaccagtcagtaacaactttatgggctgtctcaaagag
gttgtatataaaaataatgatgtaaggctggagctatcgcgacttgccaagcaaggagat
gctaagatgaagatccatggtgtggtggcttttaagtgcgaaaatgtggcaaccttagac
ccgattactttcgagaccccagaatctttcatttctttgcctaagtggaatgcaaagaaa
acaggctcaatatcatttgatttccgtacaacggagccaaatggcctcatattgtttagc
catggcaagccaagacatcagaaggatgccaagcacccacagatgattaaggttgacttt
tttgctattgaaatgctggatggccacttgtacctcctcttagacatgggatcaggtact
ataaaaatcaaagccctacaaaagaaagtcaatgatggagaatggtatcacgtggatttc
cagcgggatggacggtcaggcaccatttctgtcaacacactgcgcactccctacacggct
cctggggagagtgagatcctagacctagatgatgacttgtatctgggtggcttgccagaa
aacaaggctggcctggtcttccccaccgaggtgtggactgctctgctcaactatggctac
gtgggctgcatccgggatctattcattgatggccagagcaaagacatccggcagatggcg
gaaattcagagcactgctggagtgaagccatcctgctcaagggagacagcaaaaccgtgc
cttagcaatccttgcaaaaacaatggcatgtgcagggatggctggaacagatacgtctgt
gattgctctggaacaggctaccttggcaggtcctgtgagagagaggcaacagttttgagc
tatgatgggagtatgtttatgaaaattcagcttccggtggtgatgcacaccgaggccgag
gacgtgtccttaaggttcagatcccagcgtgcatatggtattttgatggcgaccacttct
agagactctgcggacactctccgactggagctagatgcagggcgtgtgaaactcacggtc
aatctagattgtatcaggattaactgtaattccagcaaaggtcctgagaccctttttgcc
ggctataacctcaatgataatgaatggcacacagtgcgtgtggttcggcgaggaaaaagt
ttaaagctgaccgtggatgatcaacaagccatgacaggtcaaatggcaggtgatcataca
aggctggagtttcataacatagagacgggcatcatcacagaacgacgctatctttcttct
gttccctccaatttcattgggcacctgcaaagcctgacatttaacggaatggcatacatt
gacttgtgtaaaaatggtgatatagattactgtgaactcaacgccaggtttggattcagg
aacatcattgcggatcctgtcaccttcaagaccaaatcgagctatgttgccttagctaca
ttgcaagcctacacttctatgcatctatttttccaattcaagacaacatccctggatgga
ctaattctgtataacagtggggatggaaatgactttattgtagttgaattagttaaaggg
tacctgcattatgtgtttgacttgggaaatggtgctaacctcatcaaagggagctcaaac
aaaccactcaatgacaatcagtggcacaatgtgatgatttcaagggacaccagcaatctt
cacacagtaaagattgacacaaaaatcacaacacaaatcactgcgggagccagaaattta
gacctcaagagtgacttgtatattggaggagtggctaaagaaacatacaaatccttgccg
aaactggtccacgccaaagaaggctttcaaggttgcctggcatctgtggacctgaatggc
agacttccagatctcatctctgatgctcttttctgcaatgggcaaattgagagaggatgt
gaagttgcattgatgaaagctgacttgcaagggcccagcacgacctgccaagaggactca
tgttcaaatcaaggtgtgtgcttgcagcaatgggatggcttcagctgtgactgtagcatg
acttccttcagtggcccactctgcaatgaccctgggacaacatatatctttagcaaaggt
ggtggacagattacatataagtggcctcctaatgaccgacccagtacacgagcagacagg
ctggccatcgggtttagcaccgttcagaaggaagcagtgttggtgcgtgtggacagttcc
tcaggcctgggtgactaccttgagcttcacatacatcaaggaaagattggagttaagttt
aatgttgggacagatgacatcgccattgaagagtccaatgcaatcattaatgatggaaaa
tatcatgtagtgcgcttcacgaggagcggtggcaatgccacgttacaagtggacagctgg
ccagtcatcgagcgctaccctgcaggaaacaatgataacgagcgcctggcgattgctaga
cagcgaattccatatcgacttggtcgagtagttgatgaatggctactcgacaaagggcgt
cagctcacaatcttcaatagccaagcaaccataattattggcgggaaagagcagggccag
cccttccagggtcagctctctgggctttactacaatggcttgaaagttctgaatatggca
gcagagaacgatgccaacatcgccatagtggggaatgtgaggctggtcggtgaagtgcct
tcctctatgacaactgagtcgacagccactgccatgcagtctgagatgtccacctcaatc
atggagaccaccacaaccctggctaccagcacagctagaagaggaaagcccccaacaaaa
gaacccatcagccagaccacggatgatatccttgtggcttcggcagagtgtcccagcgac
gatgaggacattgacccctgtgagccgagctcagctaaccctacccgagtcggaggccgc
gaaccatacccaggctccgcagaagtgatccgggagtccagcagtaccactggcatggtg
gtggggattgtagcggcagctgctctgtgcatcctcatcctcctctatgccatgtacaag
tacagaaaccgggatgaagggtcataccacgtggatgagagtcgaaactacatcagtaac
tcagcacagtccaatggggctgtggtcaaggagaagcagcccagcagtgcgaagagcgcc
aacaaaaacaagaagaacaaggataaggagtattatgtctga
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integrated database retrieval system
