Arvicanthis niloticus (African grass rat): 117716924
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Entry
117716924 CDS
T08817
Symbol
Tmc1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
117716924 (Tmc1)
03037 Cilium and associated proteins [BR:
anu03037
]
117716924 (Tmc1)
Transporters [BR:
anu02000
]
Other transporters
Pores ion channels [TC:
1
]
117716924 (Tmc1)
Cilium and associated proteins [BR:
anu03037
]
Other cilia and associated proteins
Stereociliary proteins
117716924 (Tmc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Ac76
Toddler
Motif
Other DBs
NCBI-GeneID:
117716924
NCBI-ProteinID:
XP_034369944
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All DBs
Position
1:complement(128543699..128649058)
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AA seq
659 aa
AA seq
DB search
MIATVKCKPWKMEKKIEVLKEAKKFVSENEGALGKGKGKKWFAFKMMMAKKWAKFLRDFE
NFKAACVPWENKIKAIESQFGSSVASYFLFLRWMYGVNMVLFILTFSLIMLPEYLWGLPY
GSLPRKTVPRAEEASAANFGVLYDFNGLAQYSVLFYGYYDNKRTIGWLNFRLPLSYFLVG
IMCIGYSFLVVLKAMTKNIGDDGGGDDNTFNFSWKVFCSWDYLIGNPETADNKFNSITMN
FKEAIIEERAAQVEENIHLIRFLRFLANFFVFLTLGASGYLIFWAVKRSQEFAQQDPDTL
GWWEKNEMNMVMSLLGMFCPTLFDLFAELEDYHPLIALKWLLGRIFALLLGNLYVFILAL
MDEINNKIEEEKLVKANITLWEANMIKAYNESLSGNTTGPPFFVHPADVPRGPCWETMVG
QEFVRLTVSDVLTTYVTILIGDFLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALI
FNQGMIWMGSFFAPSLPGINILRLHTSMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLL
LILFLSTMPVLYMIVSLPPSFDCGPFSGKNRMFEVIGETLEHDFPSWMAKILRQLSNPGL
VIAVILVMVLTIYYLNATAKGQKAANLDLKKKMKQQALENKMRNKKMAAARAAAAAGGQ
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgattgctactgtcaaatgtaaaccttggaaaatggagaagaaaattgaagttctcaag
gaagcaaagaaatttgtgagtgagaatgaaggagctcttgggaaaggaaagggaaagaag
tggtttgcatttaagatgatgatggccaagaaatgggcaaaattcctccgtgattttgag
aacttcaaagctgcttgcgtcccctgggaaaacaaaatcaaggcaattgaaagtcagttt
ggttcctcagtggcctcctacttcttgttcctgaggtggatgtatggcgtcaacatggtt
ctctttatactaaccttcagcctcatcatgttacccgagtacctctggggtttaccatat
ggcagcttacctaggaaaacagtcccaagagctgaagaggcatctgcagccaactttggt
gtgttgtatgacttcaacggtctggcacagtactcagtcctcttttatggctattacgac
aataaacgcacgatcggatggctgaatttccggctacctctttcctacttcctggtgggg
attatgtgcattggatacagctttctggttgtcctcaaagcgatgaccaaaaatattggt
gacgatggtggtggcgatgacaacactttcaacttcagctggaaggtgttctgcagctgg
gactatctgattggtaaccctgaaacagctgacaacaaatttaattctatcacgatgaac
tttaaggaagccatcatagaagagcgagcagcccaggtggaggagaatatccacctcatc
agattcctgaggtttcttgctaacttcttcgtgttcctaacacttggtgcaagtggatac
ctcatcttttgggctgtgaagcgatcccaggaatttgcccagcaagatcctgacaccctt
gggtggtgggaaaaaaatgaaatgaacatggttatgtccctcctggggatgttctgtccc
acactgtttgacttatttgctgaactggaagattaccatcctctcattgctctgaagtgg
ctcctggggcgtatttttgctcttcttctaggcaacttgtatgttttcattcttgccttg
atggatgagattaacaacaagattgaagaggagaagctcgtgaaggccaatatcaccctg
tgggaagccaacatgattaaggcttacaatgaatctctctctgggaacaccacaggacca
cccttttttgttcatcctgctgatgtacctcgaggtccctgctgggaaacaatggtgggg
caggaatttgtacgtcttactgtttctgatgttctgaccacttatgtcactatcctcatt
ggtgacttcctcagagcatgcttcgtgaggttctgcaattactgctggtgctgggactta
gaatatggatatccttcatacacagaattcgacatcagtggcaacgtccttgctctgatc
ttcaaccaaggcatgatctggatgggctccttctttgctcctagcctcccaggcatcaac
atcctccgactccacacatccatgtatttccagtgctgggctgtgatgtgctgcaatgtt
cccgaggccagggtcttcaaagcttccagatccaacaacttctaccttggcatgctgcta
ctcatcctcttcctgtccaccatgcctgtcctgtacatgattgtctccctcccaccatct
tttgattgtgggcccttcagtggtaaaaacagaatgtttgaagtcattggtgagaccctg
gaacacgatttcccaagctggatggcgaagatcctgaggcagctttctaaccccggcctt
gtcattgctgtcattctggtgatggttttgaccatctattatctcaatgctactgccaag
ggccagaaagcagcaaatctggatctcaaaaagaagatgaaacagcaagctttggagaac
aaaatgcgaaacaagaaaatggcagccgctcgagcagctgcagctgctggtggccagtaa
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