Arvicanthis niloticus (African grass rat): 117716954
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Entry
117716954 CDS
T08817
Symbol
Scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117716954 (Scfd1)
Membrane trafficking [BR:
anu04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
117716954 (Scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117716954 (Scfd1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec1
cwf21
Motif
Other DBs
NCBI-GeneID:
117716954
NCBI-ProteinID:
XP_034369990
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All DBs
Position
11:complement(17186334..17249310)
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AA seq
639 aa
AA seq
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MVGSKMASPPSIRERQTVALKRMLNFNVPHVKNSTGEPVWKVLIYDRFGQDIISPLLSVK
ELRDMGITLHLLLHSDRDPIPDVPAVYFVMPTEENIDRLCQDLRNQLYESYYLNFISAIS
RSKLEDIANAALAASAVSQVTKVFDQYLNFITLEDDLFVLCNQNKELVSYRAINRPDITD
TEMETVMDTIVDSLFCFFVTLGAVPIIRCSRGTAAEMVAVKLDKKLRENLRDARNSLFTG
DPLGTGQFSFQRPLLVLVDRNIDLATPLHHTWTYQALVHDVLDFHLNRVHLEESTGVENS
PAGARPKRKNKKSYDLTPVDKFWQKHKGSPFPEVAESVQQELESYRAQEDEVKRLKSIMG
LEGEDEGAISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLEHIKARKLDVYFE
YEEKIMSKTTLDKSLLDVISDPDAGTPEDKMRLFLIYYISAQQAPSEVDLEQYKKALTDA
GCNLSPLQYIKQWKAFAKMASTPASYGSTTAKPMGLLSRVMNTGSQFVMEGVKNLVLKQQ
NLPVTRILDNLMEMKSNPETDDYRYFDPKMLRSNDSSVPRNKNPFQEAIVFVVGGGNYIE
YQNLVDYIKAKQGKHILYGCSEIFNATQFIKQLSQLGQK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaagcaagatggcgtccccgcccagcattcgggagaggcaaacagtggctctg
aagcggatgctgaatttcaatgtacctcatgttaaaaacagtactggagaaccagtatgg
aaggtactcatttatgacagatttggccaagatatcatctctcctctgctgtctgtgaag
gagctcagagacatgggcatcactctgcacctccttttgcactcagaccgagatccgatt
ccagatgttcctgcagtgtactttgtgatgccaaccgaagaaaatattgacagactgtgc
caggatcttcgaaatcagctctatgagtcctattatttaaattttatttctgcaatttca
agaagtaaactggaagacattgcaaatgcagcattggccgctagtgcagtctcacaggtt
accaaggtttttgaccagtatctcaattttattactttggaagatgacttgtttgtatta
tgtaatcaaaataaggagcttgtttcatatcgtgccattaataggccagatatcacagac
acagaaatggaaactgttatggacactattgttgacagcctcttctgcttttttgttaca
ttaggtgctgttcccatcatccgatgctcaagaggaacggcagcagaaatggtggcagtg
aaactcgataaaaaacttcgggaaaatctaagagatgcaagaaacagcctttttactggt
gatccactcggaactggccagttcagcttccaaaggcctttattagtccttgtcgacaga
aacattgatttggcaacaccgttacaccatacatggacataccaagcgctggtacatgat
gtgctggatttccacttaaacagagtacatttggaagaatctacaggagtggaaaattct
ccagctggtgctagaccaaaaaggaaaaacaagaagtcttacgatttaactccagttgat
aaattttggcagaaacataaaggaagtccattcccagaagtcgcagaatcggtccagcaa
gagctagaatcttacagagcacaagaagatgaggtcaaacgactgaagagcattatggga
ctagaaggagaggacgaaggagccatcagcatgctttctgataacactgctaagctcaca
tcagctgtcagttctttgccagaactccttgaaaaaaaaagacttattgatctccacaca
aatgttgccactgctgttttagaacacataaaggcaagaaaactggatgtgtattttgaa
tatgaagaaaaaataatgagcaagactactctggataagtcccttctagatgtcatatct
gaccctgatgcagggactccggaagacaaaatgaggctgtttcttatctattacatcagc
gcacagcaagcaccatctgaggttgatttggagcagtataaaaaggctttaacagatgca
ggatgcaaccttagccctttacagtatatcaaacagtggaaggcttttgccaagatggcc
tcaactcctgccagctatgggagcactaccgctaaaccaatgggtctcctatcccgagtc
atgaatacaggatcacagtttgtgatggaaggtgtgaagaacctggtattgaagcagcag
aatctacctgttactcgaattttagacaatctcatggagatgaagtcaaaccctgaaacg
gatgattatagatattttgatcccaaaatgctgcggagtaatgacagctcagttcctagg
aacaaaaatccattccaagaggccattgtctttgtggtaggaggaggcaactatattgaa
tatcagaatcttgttgactacataaaggcaaagcaaggcaagcatattttgtatggctgc
agtgagatttttaatgctacacagtttataaaacagttgtcgcagcttggacaaaaataa
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