Arvicanthis niloticus (African grass rat): 117716965
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Entry
117716965 CDS
T08817
Symbol
Cbll1
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117716965 (Cbll1)
04131 Membrane trafficking [BR:
anu04131
]
117716965 (Cbll1)
04121 Ubiquitin system [BR:
anu04121
]
117716965 (Cbll1)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117716965 (Cbll1)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
117716965 (Cbll1)
Membrane trafficking [BR:
anu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117716965 (Cbll1)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117716965 (Cbll1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-RING_2
Zn_ribbon_6
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
117716965
NCBI-ProteinID:
XP_034370011
LinkDB
All DBs
Position
11:34875810..34887504
Genome browser
AA seq
491 aa
AA seq
DB search
MDHTDNELQGTNSSGSLGGLDVRRRIPIKLISKQANKVKPAPRTQRTISRMPAKAPQGDE
EGFDYNEEQRYDCKGGELFGNQRRFPGHLFWDFKINILGEKDDTPVHFCDKCGLPIKVYG
RMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCTRGSLFMCSIVQGCKRTYLSQR
DLQAHINHRHMRAGKPVTRASLENVHPPIAPPPTEIPDRFIMPPDKHHMSHIPPKQHIMM
PPPPLQHVPHEHYNQPHEDIRAPPAELSMAPPPPRSVSQETFRISTRKHSNLITVPIQDD
SSSGAREPPPPAPAPAHHHPEYQGQPVVSHPHHIMPPQQHYAPPPPPPPPISHPMPHPPQ
AAGTPHLVYSQAPPPPMTSAPPPITPPPGHIIAQMPPYMNHPPPGPPPPQHGGPPVTAPP
PHHYNPNSLPQFTEDQGTLSPPFTQPGGMSPGIWPAPRGPPPPPRMQGPPSQTPLPGPHH
PDQTRYRPYYQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggatcacactgacaatgagttacaaggcactaatagttctggatccttgggtggtctt
gatgttcgcagaagaattcctataaaactgatctccaaacaagccaacaaagttaaacct
gcacctcgaactcaaaggactattagcaggatgcctgcaaaggccccacaaggtgatgaa
gaaggatttgattataacgaagaacagcggtatgactgtaaagggggcgaactctttggg
aatcagcgaagatttccaggacatcttttttgggattttaagataaacatcttaggtgaa
aaggatgatacaccagttcatttctgtgacaaatgtggattacctattaaagtgtatggg
agaatgattccatgcaagcatgtcttttgctatgactgtgctattttacatgaaaaaaaa
ggagataagatgtgtccagggtgtagtgatcctgtgcagcggattgaacagtgcacacga
gggtctctcttcatgtgtagcattgttcaaggttgcaaaagaacatacctgtctcagagg
gacttacaagctcatatcaaccatcgccatatgagagctggaaagcctgttacccgtgct
tcacttgagaatgttcatcctcctattgccccaccaccaactgaaattcccgatcgtttc
ataatgccaccagacaagcatcatatgagccatattcctccaaagcagcacatcatgatg
ccaccacctcctctgcagcatgtgccacatgagcactataatcagccacacgaggatatt
cgtgctcctccagcagaattgtccatggctccacctccacctcggtcggtcagtcaggaa
acctttcgtatttcaacaagaaaacacagcaatttaataactgtccctattcaggatgac
tcaagttcaggtgctagagaaccaccacctcctgccccagcacctgctcatcatcatcct
gaataccagggtcagccagtggtatctcatcctcatcatattatgcctccacagcagcat
tatgcaccacccccacctcctccaccaccaataagccatccaatgccacatcctccccag
gctgcaggtactcctcacttggtatatagccaagctccacctccaccaatgacctctgct
ccaccaccaataacccctccccctggacatattattgcccagatgccaccttatatgaat
catcctccaccaggaccccctccacctcagcatggtggtccacctgtaactgcaccccct
cctcaccattacaatcctaactctttaccccagtttactgaagatcaaggaactctaagc
cctccatttacacaaccaggaggaatgagtcccggtatatggcctgcaccaagagggccg
ccacctcctccacgaatgcagggcccgccttctcaaaccccactacctggaccacatcat
ccagatcaaacaagatatagaccgtattaccagtga
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