Arvicanthis niloticus (African grass rat): 117716970
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Entry
117716970 CDS
T08817
Symbol
Epcam
Name
(RefSeq) epithelial cell adhesion molecule
KO
K06737
epithelial cell adhesion molecule
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03272
Virion - Hepatitis viruses
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117716970 (Epcam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117716970 (Epcam)
04090 CD molecules [BR:
anu04090
]
117716970 (Epcam)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117716970 (Epcam)
Exosomal proteins of colorectal cancer cells
117716970 (Epcam)
CD molecules [BR:
anu04090
]
Proteins
117716970 (Epcam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPCAM-Trop-2_C
EpCAM_N
Thyroglobulin_1
DUF4006
Pathogen_betaC1
Trp_oprn_chp
PMP1_2
Motif
Other DBs
NCBI-GeneID:
117716970
NCBI-ProteinID:
XP_034370025
LinkDB
All DBs
Position
11:complement(78825981..78840982)
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AA seq
315 aa
AA seq
DB search
MAPPQALAFGLLLAVVTLTLAAAQKDCVCDNYKLATSCSQNENGECQCTSYGTQNTVICS
KLASKCLVMKAEMTHSKSGRRMKPEGAIQNNDGLYDPECDEQGLFKAKQCNGTATCWCVN
TAGVRRTDKDTEITCSERVRTYWIIIELKHKERQNPYDLQSLQTALQDTFTSRYKLNQKF
IKNIMYENNVITIDLMQNSSQKARDDVDIADVAYYFEKDVKGESLFHSSKNMDLRVNGEP
LDLDPGQTLIYYVDEKAPEFSMQGLTAGIIAVIVVVTLAVIAGIVVLVISTRKKSAKYEK
AEIKEMGEIHRELNA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccccccaggccctcgcgttcgggctcctgcttgcggtggtcacgttgacgctg
gccgcggctcagaaagactgtgtgtgtgacaactacaagctggcgacaagttgctctcag
aatgaaaatggtgaatgccagtgtacttcttatggtacacaaaatactgtcatctgctcc
aaactggcatccaaatgtttggtgatgaaggcggagatgactcacagcaagtctgggagg
aggatgaagccggaaggggccatccagaacaacgacggtctgtatgatcccgagtgtgac
gagcaagggctcttcaaagccaagcagtgcaatggcaccgccacatgctggtgtgtgaac
actgctggagtccgcagaacggacaaggacaccgagataacgtgctctgagagagtgagg
acctattggatcatcattgaactaaaacataaagaaagacaaaacccttatgaccttcag
agtttgcagactgcacttcaggacacgtttacatctcgatataaactgaatcagaaattt
atcaaaaacattatgtatgagaataacgttatcactattgatttgatgcaaaactcttct
cagaaagcgcgagacgatgtggacatagctgatgtggcctactattttgaaaaagatgtg
aagggggaatccttgttccattcttctaagaacatggacctgagagtgaatggagagcca
cttgatctggaccccgggcagactctgatttactacgttgatgaaaaggcacccgagttt
tccatgcagggcctcacggctgggatcattgccgtcattgtggtggtgacattagcagtc
atcgcggggattgttgtcctggttatatctacaaggaagaaatccgccaaatatgagaag
gctgagataaaggagatgggtgagatacacagagagctcaatgcctaa
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