Arvicanthis niloticus (African grass rat): 117716971
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Entry
117716971 CDS
T08817
Symbol
Lamb1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04151
PI3K-Akt signaling pathway
anu04510
Focal adhesion
anu04512
ECM-receptor interaction
anu05145
Toxoplasmosis
anu05146
Amoebiasis
anu05165
Human papillomavirus infection
anu05200
Pathways in cancer
anu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117716971 (Lamb1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117716971 (Lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117716971 (Lamb1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117716971 (Lamb1)
09162 Cancer: specific types
05222 Small cell lung cancer
117716971 (Lamb1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117716971 (Lamb1)
09174 Infectious disease: parasitic
05146 Amoebiasis
117716971 (Lamb1)
05145 Toxoplasmosis
117716971 (Lamb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
CorA
HU-CCDC81_bac_2
ATG17_like
Motif
Other DBs
NCBI-GeneID:
117716971
NCBI-ProteinID:
XP_034370026
LinkDB
All DBs
Position
11:complement(35024269..35088995)
Genome browser
AA seq
1834 aa
AA seq
DB search
MERPLSSLPAFAFSLLYLSRKEDTKKRQAACLPCPPSRAASPRLQGLDMGLLQVFAFGVL
ALWGTRVCAQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHKPEPYCIVSHLQE
DKKCFICDSRDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVENVTIQLDLEAEFH
FTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGISTGPMKKVDDIICDS
RYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKLHTLGDNLLDSRM
EIREKYYYAVYDMVVRGNCFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELC
MDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGR
NCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENEGICDGYTDFSVGLIAGQCRCKLHV
EGERCDVCREGFYDLRAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ
CLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNEVESGYYFTTL
DHYIYEAEEANLGPGVVVVERQYIQDRIPSWTGPGFVRVPEGAYLEFFIDNIPYSMEYEI
LIRYEPQLPDHWEKAVITVQRPGKILTSSRCGNTVPDDDNQVVSLSPGSRYVVLPRPVCF
EKGMNYTVRLELPQYTASGSDVESPYTLIDSLVLMPYCKSLDIFTVGGSGDGEVTNSAWE
TFQRYRCLENSRSVVKTPMTDVCRNIIFSISALIHQTGLACECDPQGSLSSVCDPNGGQC
QCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSVSAFCDAVTGQCHCFQGIYARQCD
RCLPGYWGFPSCQPCQCNGHAEDCDTVTGECLSCQDYTTGHNCERCLAGYYGDPVIGSGD
HCRPCPCPDGPDSGRQFARSCYQDPVTLQLVCVCDPGYIGSRCDSCASGFFGNPSDFGGS
CQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDSCQLCQYGYYGDALRQDCRKCVCNY
LGTVKEHCNGSDCHCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASGTGCEPCNCNAAHSF
GPSCNEFTGQCQCMPGFGGRTCGECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQCV
CVEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDVIIGELTNRTHKFLEKAKALKISGV
IGPYRETVDSVEKKVNEIKDILAQSPAAEPLKNIGILFEEAEKLTKDVTEKMAQVEVRLS
DTASQSNSTAGELEALQAEAESLDKTVKELAEQLEFIKNSDIQGALDSITKYFQVSLEAE
QRVNASTTDPNSTVEQSALTRDRVEDLMLERESQFKEKQEEQARLLDELAGKLQSLDLSA
AAEMTCGTPPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSAWQKAMDFDRDVL
SALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLRNLIKQIRDFLT
EDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVILQQSAADIARAE
LLLEDAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQGTQNLLTSIES
ETAASEETLTNASQRISNLERNVEELKRKAAQNSGEAEYIEKVVYTVKQSADDVKRTLDV
ELDEKYKKVESLIAQKTEESADARRKAELLQNEAKTLLAQANSKLQLLEDLERKYEDNQK
YLEDKAQELVRLEGEVRSLLKDISEKVAVYSTCL
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggcccctctcctctctcccagcatttgccttttccctcctctacctctccaga
aaggaagacacgaagaaaagacaagcagcttgcctgccgtgtcctccttcccgtgccgcg
tcccctcggctgcaaggactggatatggggctgctccaggtgttcgcctttggtgtccta
gccctatggggcacccgagtgtgcgctcaggaaccagagttcagctatggttgtgcggaa
ggcagctgctaccctgccactggcgaccttctcattggtcgagcgcaaaagctctcagtg
acctcgacatgcggactgcacaaaccggagccctactgtattgtcagccacctgcaggag
gacaagaaatgcttcatatgtgattcccgagatccttatcatgagaccctcaatcctgac
agccatctcattgaaaatgtggtcacgacatttgccccaaaccgccttaagatttggtgg
cagtccgaaaatggtgtggagaatgtaactatccagctggatctggaagcagaattccac
ttcactcatctcatcatgactttcaagacattccgtccagctgccatgctgatagagcgg
tcttctgacttcgggaagacttggggagtgtacagatacttcgcctacgactgtgagagc
tcattcccaggcatttcaactgggcccatgaagaaggtggatgacatcatctgtgactct
cgatattctgacattgagccctcaacagagggagaggtgatatttcgagctttagatcct
gctttcaaaattgaagatccttatagtccaaggatacagaatctattaaaaatcaccaac
ttgagaatcaagtttgtgaaactgcataccttgggagataaccttttggactccagaatg
gaaatcagagagaagtactattatgctgtgtatgatatggtggttcgcgggaactgcttc
tgctatggacatgccagtgagtgcgcccctgtggatggagttaatgaagaagtagaagga
atggttcatgggcactgcatgtgcagacacaacaccaaaggcctgaactgtgagttgtgc
atggatttttaccatgatttgccgtggagacccgctgaaggccggaacagcaacgcctgc
aaaaaatgtaactgcaatgaacattccagctcgtgccactttgacatggcagtcttcctg
gctactggaaacgtcagtgggggagtgtgtgataactgtcagcacaacaccatggggcgc
aactgtgagcagtgcaagccgttctacttccagcatcctgagagggacatccgagacccc
aatctctgcgaaccatgcacctgtgacccagctggttctgagaatgaaggaatctgtgat
ggttacactgatttttctgtgggtctcattgctggtcagtgtcggtgcaaattgcacgtg
gagggagagcgctgtgatgtttgtagagaaggcttctatgacttacgtgctgaagacccg
tatggttgtaaatcgtgtgcttgcaatcctctgggaacaattcctggtgggaatccttgt
gattctgagaccggttactgctactgtaaacgcctagtgactggacagcgctgtgaccag
tgcctgccgcagcactggggcttgagcaatgatttggatggatgtcgaccttgtgactgt
gaccttggaggggcgttgaacaatagctgctccgaggactccggccagtgctcctgcctg
ccccacatgattgggcggcagtgtaacgaggtggagtcaggttactacttcacaaccctg
gaccactacatctatgaagccgaggaagccaatctggggcctggagtcgttgtggtggaa
aggcagtacattcaggaccgaattccttcctggacaggacctggctttgtccgagtgcct
gagggagcctatttggagtttttcattgacaacataccgtattccatggaatatgaaatc
ctaattcgctatgagccacagctgccggaccactgggagaaagctgtcatcactgtacaa
cggccggggaagattctaaccagcagccgatgtggtaacactgttcctgatgatgacaac
caggtggtgtccttgtcaccaggctcaagatatgttgtcctccctcgcccggtgtgcttt
gaaaagggaatgaactatacggtgaggttggagctgccccagtatacggcgtcaggcagt
gatgtggagagcccatacaccctcatcgactcacttgttctcatgccctattgtaaatca
ctggacatcttcaccgttggaggctcaggagatggggaggtcaccaatagcgcctgggaa
accttccagcgctacaggtgtctggagaacagccggagtgtggtaaaaacgcccatgaca
gatgtctgcagaaacattatcttcagcatttctgccttgattcaccagacgggccttgcc
tgtgaatgtgatcctcagggttctctgagttctgtgtgtgaccccaatggaggccagtgc
cagtgccgccctaatgtggttggaagaacctgcaacaggtgtgccccaggcaccttcggc
tttggtcccaacggatgcaaaccttgtgactgccatctacaagggtctgtcagtgccttc
tgtgatgctgtcactggccagtgccactgtttccagggcatatatgctcggcagtgtgac
cgatgtctccctgggtattggggctttcccagctgccagccctgccagtgtaatggtcat
gcagaagactgtgacacagtgacaggggagtgtctgagctgtcaggactataccacaggc
cacaactgcgaaaggtgcctggctggttactatggtgatcccgtcattgggtcaggagac
cactgtcgcccttgcccatgtcctgatggtcctgacagtggacgccagtttgccaggagc
tgttaccaagaccctgttactctccagctcgtgtgtgtttgcgatcctgggtacattggc
tccagatgtgatagctgtgcctctgggttttttggcaatccctcagactttgggggttcc
tgtcagccatgccagtgtcaccacaacattgacactaccgatccagaagcctgtgacaag
gagaccggacgatgcctcaagtgtctgtaccacacagaaggggacagttgccagctctgc
cagtatgggtactatggtgatgctctccggcaagactgtagaaagtgtgtctgcaattac
ctgggcacggtgaaggagcattgcaatggctctgactgccactgtgacaaaaccactggt
cagtgcttgtgtcttccgaatgtcatcgggcagaactgtgaccggtgtgcacccaacacc
tggcagctggctagcgggactggctgcgagccatgcaattgcaatgctgcacattccttt
gggccatcctgcaatgagttcacagggcagtgccagtgcatgccgggctttggaggccga
acctgtggcgagtgccaggagctcttctggggagaccccgatgtggaatgccgagcctgt
gactgtgatcccaggggcattgagacaccacagtgtgaccagtccacgggccagtgtgtc
tgtgtggagggtgttgagggtccacgctgtgacaagtgcaccagagggtactcaggggtc
ttccctgactgcacaccctgccaccagtgctttgctctctgggatgtgatcattggtgag
ctcaccaacaggacccacaaattcctggagaaagccaaggctttgaaaatcagtggtgtg
attggtccctaccgagagaccgtggactccgtggagaagaaagtcaatgagataaaagac
atcctggcccagagcccagcagcagaaccactgaaaaacattggcattctctttgaggag
gcagagaaattaaccaaagatgtcacagaaaagatggctcaagtagaagtgagattgtct
gatacagcttcacagagtaacagcacagctggagagctagaagcactgcaggcggaagca
gagagccttgacaagaccgtaaaagagctggcagaacagctagaatttatcaaaaactcc
gacattcagggtgccttggatagtatcaccaagtatttccaggtctctcttgaggcggaa
cagagggtgaatgcctctaccacagaccccaacagcactgtggagcagtcagccctcacc
cgagacagagtagaagatctgatgttggaacgagagtctcagttcaaggagaagcaggag
gaacaggcacgccttctggatgaactggctggcaaactgcaaagtctagacctgtcggct
gccgcagagatgacctgtggaacacctccaggggctgactgttctgaaagtgaatgtggt
ggccccaactgcagaactgatgaaggagagaagaagtgtgggggccctggctgtggtggt
ctggtcactgtggcccatagtgcctggcagaaagccatggattttgaccgtgatgtcctg
agtgccttggccgaggtagaacagctctccaagatggtctctgaagcaaaagtgagagca
gatgaggccaagcagaatgctcaggatgtcctgttgaaaacaaatgctaccaaagaaaaa
gtggacaagagcaatgaggacctgaggaacctcatcaagcagatcagagacttcttgact
gaggatagtgctgatctagacagtattgaagcagttgctaatgaggttctgaaaatggaa
atgccgagcacgccacagcagttacagaacctcacagaagacatccgggaacgagtcgaa
accctttctcaagtagaggtcattttgcagcagagtgctgctgacattgccagagctgag
ctgttgcttgaagatgctaagagagcaagcaaaagtgcaacagacgttaaagtcactgca
gacatggtgaaggaagcattagaagaagcagaaaaggcccaggttgcagcagagaaggca
attaaacaagctgatgaggacatccaaggaacccaaaacctgctaacgtcgattgaatct
gaaacagcagcttctgaggaaaccctgaccaacgcctcccagcgcatcagcaaccttgag
aggaatgtggaagaacttaaacgtaaagctgcccagaactctggggaggcagaatatatt
gaaaaagtagtatatactgtaaaacagagtgcagacgatgttaagaggactctagatgtc
gaactggatgaaaagtataagaaggtagaaagtttaattgctcaaaaaactgaagagtca
gcagatgccaggaggaaagctgagctgctacaaaatgaagcaaaaacactcttggcccaa
gccaacagcaaacttcagctgttagaagacttagaaaggaaatatgaggacaaccaaaag
tacttagaagataaagcacaagaactagtgcggctggaaggagaggtccgctcactcctg
aaggacataagcgagaaagttgctgtttacagcacctgcttataa
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integrated database retrieval system
