Arvicanthis niloticus (African grass rat): 117717058
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Entry
117717058 CDS
T08817
Symbol
Trappc12
Name
(RefSeq) trafficking protein particle complex subunit 12 isoform X1
KO
K20309
trafficking protein particle complex subunit 12
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117717058 (Trappc12)
Membrane trafficking [BR:
anu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
117717058 (Trappc12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_19
TPR_6
TPR_17
TPR_16
TPR_8
TPR_14
Coatomer_E
ANAPC3
TPR_9
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
117717058
NCBI-ProteinID:
XP_034370167
EnsemblRapid:
ENSANLG00005012147
LinkDB
All DBs
Position
11:37425159..37487119
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AA seq
798 aa
AA seq
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METAKDGEQSSSETSPPALAGPENTLEPVSGEVESQPLYHEETIDLGGDEFASEENEPTS
ESSHNLGDKLNEHMMESVLISDSPNNSEGDVGDLGCLQDVGEPPRAATDHRLPGSPDKEV
VDTLSNGSETDGDDTPRDISDMTPDSRASLKEDSTQEDVTGMPALENAGTEEVGPKDSLA
PPEEQTSEVSSSQSSSKDEPLPVCTIFSQAASTPSQTHLFLQDGFESQMVKSPSFSSTSE
TSAKTPPPMVQPSPSLSTFFGDTMSSNSLASDFFDSFTTSTFISVSNPNAGSPVPEKLSS
LAAPVGEKSPDSTSPSYSTRMERSESGVSRAPLDVPESPKPFSQIQAVFAGSDDPFATAL
SMSEMDRRNDAWLPSQATREVLMSVATQQYGTVFIDKENLTMPGLKFDNIQGDAVKDLML
RFLGEKAAAKRQVLNANSVEQSFVGLKQLISCRNWRAAVDLCGRLLTAHGQGYGKSGLPT
SHTTDSLQLWFVRLALLVKLGLFQNAEMEFEPFGNLDQPDLYYEYYPHVYPGRRGSMVPF
SMRILHAELQQYLGNPQESLDRLHRVKTVCSKILANLEQGLAEDGGLSSVTQESRQASVQ
LWRSRLGRVLYSMANCLLLMKDYVLAVDAYLTVIKYYPEQEPQLLSGIGRILLQQIGDIR
TAEKYFQDVEKVTQKLDGLQGKIMVLMNRAFLYLGQNNFAEAHKFFTEILRMDPTNAVAN
NNAAVCLLYLGKLKDSLRQLEAMVQQDPKHYLHESVLFNLTTMYELESSRSMQKKQSLLE
AVASKEGDSFNTQCLKLA
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagctaaagatggtgagcagagctcaagtgagacgtctcctccagccctggcg
ggtcctgaaaacaccctggagcctgtgtctggggaggtggagagccagccgttgtaccac
gaggagaccatagatcttggtggagatgagtttgcatctgaagagaacgagcccacatct
gaaagttctcacaacttgggagataagcttaatgagcacatgatggagagcgtgctcatc
tccgactctcctaacaacagtgagggtgacgtgggcgacctcggctgtctacaggatgtt
ggggagccccccagagctgccactgatcacagattgcccggtagcccagacaaagaagtg
gtggacactctgagtaatggcagtgaaactgacggagacgatactcccagagacatctca
gacatgacgcctgatagcagagcctctctgaaagaagactcaacacaggaagatgtgacg
ggcatgcctgcactggagaatgctggcacggaggaagtggggcctaaggacagcctcgcg
cccccagaagagcagacctcagaagtgtcctccagtcagtcctcctctaaagacgagccc
ttgcccgtctgcaccatcttcagccaggccgcctccactccctcccagacacacctgttt
ctacaggatggtttcgagtcccagatggtgaaatctcccagtttcagtagcaccagtgag
acgtcagccaagacccctcctccaatggtccagcccagtcccagcctgagtacctttttt
ggagatacaatgagctctaattccttggcctctgacttctttgattccttcacaacgtct
actttcatttcagtcagtaatcccaacgcaggttccccagttccagaaaagctgtcttca
ctcgctgcccctgtaggagaaaagtcaccagattccaccagcccatcttactctacaagg
atggagagatcagaatcaggtgtttctcgggcccctctggatgttcctgaatctccaaag
ccattctcacagatccaggctgtgtttgctgggagtgatgaccccttcgccacagccctg
agcatgagtgagatggaccggaggaatgacgcatggcttcccagtcaggcgaccagagaa
gtcctgatgtcagtagcaacccagcaatatggcactgtattcatagacaaggagaacctc
actatgcctggcctcaagtttgacaacattcagggagatgcagttaaagacttgatgctt
cgcttcctgggtgaaaaggctgcagcaaagagacaagtcttaaatgccaactcggtggaa
cagtcctttgtggggctgaagcagctcattagctgcaggaactggagggcggcagtcgac
ttgtgtggacgcctgctcacagcacacggacaaggctatggcaagagtggactgcccacc
agccacaccacagactccttgcagctctggtttgtgaggttggcactgctggtgaagttg
ggccttttccagaatgctgagatggaatttgaacccttcggaaatctggatcagccagac
ctgtattatgaatactacccacacgtatacccaggacgcaggggctccatggtccccttt
tcgatgcgcattctgcatgcagaactgcagcagtatctggggaatccacaggagtccctg
gaccggttacacagggtcaagaccgtctgcagcaagatcctggccaacttggagcaaggc
ttagctgaagatggtggtctgagcagcgtcacccaggaaagcaggcaagcctctgttcag
ctgtggaggtctcgtctgggccgtgtgctgtactccatggcaaactgtctgctcctgatg
aaggactacgtgctggctgtagacgcctacctcacagtgatcaagtactacccggagcag
gagccacagctgctgagtggtattggccgaattctcctccagcagattggagacataaga
acagctgaaaaatattttcaagatgttgagaaagtaactcagaagttggatggactgcag
ggtaaaataatggttttaatgaacagagcctttctgtacctcggccagaataactttgca
gaagctcacaagttcttcacagagattttgaggatggacccaacaaatgcagtggccaac
aacaatgctgctgtgtgtttgctttacctgggaaagctcaaggactccctgcggcagctg
gaggctatggtgcagcaggaccccaagcactacctgcacgagagcgtgctcttcaacctg
accaccatgtatgagctggagtcctcaaggagcatgcagaagaagcagagcctacttgag
gccgtagctagcaaagaaggggacagcttcaacacacagtgcctgaagctggcctag
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