Arvicanthis niloticus (African grass rat): 117717069
Help
Entry
117717069 CDS
T08817
Symbol
Msh2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu01524
Platinum drug resistance
anu03430
Mismatch repair
anu05200
Pathways in cancer
anu05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
117717069 (Msh2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117717069 (Msh2)
09162 Cancer: specific types
05210 Colorectal cancer
117717069 (Msh2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
117717069 (Msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anu03400
]
117717069 (Msh2)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
117717069 (Msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
117717069
NCBI-ProteinID:
XP_034370183
LinkDB
All DBs
Position
11:complement(78759699..78818541)
Genome browser
AA seq
933 aa
AA seq
DB search
MAVQPKETLQLEGAAEVGFVRFFEGMPEKPSTTVRLFDRGDFYTTHGEDALLAAREVFKT
QGVIKYMGPAGTKTLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGIMGIKMSIVDGQRQIGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKKADFSTKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDMAAVRALNLFQGSVEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDRNRIEERL
NLVETFIEDSELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPNVIQA
LEKYQGRHQALLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREVMDALEKKMQSTLISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
HLDAVVSFAHVSNAAPVPYVRPVILEKGKGRIILKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSMVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMF
ATHFHELTALASQIPTVNNLHVTALTTEETLTMLYQVRKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQSIGTSLGYDEAEPAAKRRCLEREQGEKIILEFLSKVKQVPFTDMS
EESISLKLKQLKAEVVAENNGFVNEIISRIKAP
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagcctaaggagacgctgcagttagagggcgcggccgaggtgggcttcgtg
cgcttctttgagggcatgccggagaagccgagcacgactgtgcgcctcttcgatcgcggc
gacttctacaccacgcacggcgaggatgcgctgctggcggcccgtgaggtgttcaagacc
caaggcgtgatcaagtacatggggccggcagggacaaagacactgcaaagtgttgtgctt
agcaagatgaatttcgagtcttttgtgaaagatcttcttctggttcgtcagtatcgagtt
gaggtttataagaataaagctgggaataaggcgtctaaggagaatgattggtatttggca
tttaaggcttctcccggcaatctttctcagtttgaagacatcctgtttggtaacaatgac
atgtcagcttccattggcattatgggtattaaaatgtccatagttgatggccaaagacag
attggagttgggtatgtggattccatacagagaaagctaggattgtgtgagttccctgat
aatgatcagttctccaatctcgaggctcttctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacatggggaaactgaggcaggttatacagagagga
gggattctgatcacagagagaaagaaagccgacttttccactaaagacatctaccaggat
ctcaaccggctattgaaaggcaaaaaaggagaacagatgaatagtgctgtcttaccagag
atggagaatcaggttgcagtttcgtcattgtctgcagtaatcaagttcttagaactctta
tcagatgattcaaattttggacagtttgagctgactacttttgactttagccagtacatg
aagttggacatggcagcagttagagccctcaaccttttccagggttctgttgaagacacc
actggctctcagtctctggctgcattattgaataaatgcaaaactgctcaaggacaaaga
ttggttaaccagtggatcaaacagccactcatggataggaacaggatagaagagagatta
aatttagtggaaacttttattgaagattcagaattgaggcagagtttacaggaggattta
cttcgccgatttccagatcttaaccggcttgccaagaaatttcagagacaagcagcgaat
ttacaagattgttatcgactgtatcagggtgtgaaccagctccccaacgtaatacaggct
ctggagaaataccaaggaagacaccaggcattgttgttggcagtttttgtgactcctctt
actgatcttcgttctgatttttcaaaatttcaagaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgagttccttgtaaaaccttcatttgatcctaacctgagtgaa
ctaagagaagtcatggatgccctggagaagaagatgcagtccaccttaataagtgcagcc
cggggtctcggattggaccctggcaaacagattaaattggactccagtgcacagtttgga
tattattttcgtgtaacctgcaaggaagagaaggtccttcgtaacaacaagaacttcagc
acagtagatatccagaagaatggcgttaaatttaccaacagtgaattgtcctctttaaat
gaagaatatactaagaacaaaggcgagtatgaggaggcccaggatgccattgttaaagaa
attgtcaatatttcctcaggctacgtggagccgatgcagacactcaatgacgtgctagct
cacttagacgccgtcgtcagctttgctcatgtgtcaaacgcagcacctgttccttatgta
cgaccagtcatcttggagaaaggaaaaggaagaattatattgaaagcctccaggcatgct
tgtgttgaagttcaagatgaagttgcgtttattccgaatgacgtgcactttgaaaaagat
aaacagatgttccacatcattactggtcccaatatgggaggtaaatcaacatacatccgt
cagactggggtgattgtactcatggcccaaattgggtgttttgtgccatgtgagtcagca
gaagtgtccatggtggattgcattttggctcgagttggggctggtgacagtcaactgaaa
ggggtctccacattcatggctgaaatgctggagactgcttctatcctcaggtcagcaacc
aaagattccttaataatcattgatgagctgggcagaggaacctcgacctacgatggattt
gggttagcatgggctatatcagattacattgcaacgaagatcggcgccttttgcatgttt
gccactcattttcatgaacttactgccttggccagtcagataccaacggttaataatcta
cacgtcacagcactgactaccgaagagaccctgactatgctttaccaagtgagaaaaggt
gtctgtgatcagagttttggaattcacgtggctgagctcgctaatttccctaggcatgtg
atagagtgcgccaagcagaaagctctggagcttgaggagtttcagagcattggaacctca
ctgggatatgatgaagccgagccagctgcaaagaggcgctgcctggaaagagagcaaggt
gagaaaattattttggagttcctgtccaaggtcaagcaagtgccctttactgacatgtcg
gaggagagcatctcactgaagctgaagcaactgaaagccgaggtggttgcagagaataac
ggttttgtaaatgaaatcatttcacggataaaggcgccgtga
DBGET
integrated database retrieval system
