Arvicanthis niloticus (African grass rat): 117717157
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Entry
117717157 CDS
T08817
Symbol
Pum2
Name
(RefSeq) pumilio homolog 2 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
117717157 (Pum2)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
DUF6922
Rad26-like_N
PC4
Motif
Other DBs
NCBI-GeneID:
117717157
NCBI-ProteinID:
XP_034370307
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All DBs
Position
11:complement(50072817..50148492)
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AA seq
1066 aa
AA seq
DB search
MNHDFQALALESRGMGELLPTKKFWEPDDSTKDGQKGIFLGDDEWRETAWGPSHHSMSQP
IMVQRRSGQSFHGNSEVNAILSPRSESGGLGVSMVEYVLSSSPADKLDSRFRKGTFGTRD
AETDGPEKGDQKGKASPFEEDQNRDLKQDDEDSKINGRGLPNGMDADCKDFNRTPGSRQA
SPTEVVERLGPSTNPPEGLGPLPNPTANKPLVEEFSNPETQNLDAMDQVGLDSLQFDYPG
NQVPMDSSGATVGLFDYNSQQQLFQRTNALTVQQLTAAQQQQYALAAAQQPHIAGVFSAG
LAPAAFVPNPYIISAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPANLFQQQ
AAAAAGNTANQQAASQAQPGQQQVLRPGAGQRPITPSQGQQGQQAESLAAAAAANPTLAF
GQSLAAGMPGYQVLAPTAYYDQTGALVVGPGARTGLGAPVRLMAPTPVLISSAAAQAAAA
AAAGGTANSLTGSTNGLFRPIGTQPPQQQQQQQPSTNLQSNSFYGSSSLTNSSQSSSLFS
HGPGQPGSASLGFGSGSSLGAAIGSALSGFGSSVGSSASSSATRRESLSTSSDLYKRSSS
SLAPIGQPFYNSLGFSSSPSPIGMPLPSQTPGHSLTPPPSLSSHGSSSSLHLGGLTNGSG
RYISAAPGAEAKYRSASSTSSLFSSSSQLFPPSRLRYNRSDIMPSGRSRLLEDFRNNRFP
NLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVI
QKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGH
VLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAE
QTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHKFASN
VVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMKDQYANYVVQKMIDMAEPAQRKII
MHKIRPHITTLRKYTYGKHILAKLEKYYLKNSPDLGPIGGPPNGML
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatgattttcaagctcttgcattagaatctcggggaatgggagagcttttgcct
accaaaaaattttgggaacctgatgattcaacaaaagatggacaaaaaggcatatttctt
ggggatgatgaatggagagagactgcatggggaccttctcatcattcaatgtcccagcct
attatggtacagagaagatctggacagagttttcatggaaacagtgaagtaaatgcaatt
ctttctccgcgctcagaaagtggaggccttggtgtgagcatggtagaatatgtattaagt
tcctctcctgctgataaattggattctcgatttaggaagggaacttttggtactagagat
gctgaaacagatggacctgagaaaggagatcaaaaaggcaaggcttctccatttgaggag
gaccaaaacagagatcttaaacaagatgatgaggactctaaaataaatggcagaggtttg
ccaaatggaatggatgccgattgcaaagattttaatcgtactcctggaagtcgtcaagcc
tctccaactgaagtagttgagcgccttggccctagtactaatcccccagaaggattgggc
ccgcttcctaatccgacagctaataaaccacttgttgaagaattttcaaatcctgaaact
cagaatctggatgcaatggaccaagttggtctggattccttacagtttgactatcctggt
aatcaggtacccatggattcttcaggagctactgtaggcctttttgactacaattcccaa
cagcagctctttcagaggactaatgcactaacagttcagcagttaactgcagctcaacag
cagcaatatgcattagcagcagctcagcagccgcatatagctggtgtattctcagcaggc
cttgctccagctgcatttgtgccaaatccatatattattagtgctgctcctccagggacc
gacccgtatactgcagcaggattggctgcagcagcaacattagcaggtccagcggtggtt
ccacctcagtattatggtgttccatggggggtgtatccagccaatttatttcagcaacaa
gctgcagctgcagcaggcaacacagccaatcagcaagcagcatcacaagctcagcctgga
cagcagcaggttcttcgtcctggagcaggtcagcgtcctattactcccagtcagggccaa
caagggcagcaagcagagtcacttgcagcagctgcagctgcgaacccaacgttggctttt
ggtcagagtcttgctgcaggcatgccaggctatcaagtactagctccaactgcctattat
gatcagactggtgccttagtagttggccctggagcaaggactggccttggagctccagta
cgattgatggctccgacacctgtcttaattagttcagcagcagcacaagctgcagcagca
gcagcagctggaggaactgcaaatagtcttacaggcagcacaaacggtctgtttcggcca
attggcactcagccaccgcagcagcagcagcagcagcaaccgagcactaacctgcagtct
aattcattttatgggagcagctctttgactaacagctcccagagcagctctttgttttct
catggacctggccaacctggaagtgcgtcccttggctttggaagtggtagctctttggga
gctgctataggctcagctctcagtggatttggctcatcagttggcagttctgcaagtagt
agtgccacaaggagagagtctctatctactagctctgacttgtacaaaagatctagtagc
agcctagcacccatagggcaaccattttacaatagtctgggattttcctcctctccaagt
ccaataggcatgcctctgccaagccaaactccaggacattcacttacgccaccgccatca
ctttcatcacatggatcctcatccagtttgcatttaggaggactgacaaatggtagtggt
cgctatatctctgcagcacctggagcagaagcaaaataccgaagtgcttcaagcacttcc
agtctatttagctccagcagccagctctttcctccttctcggctccgctataatagatct
gatatcatgccctccggccgcagtaggttattggaagatttcaggaacaaccgcttcccc
aaccttcagctcagagacttgattggacatatagttgagttttctcaagaccagcatggc
tccagattcatacaacaaaagctagagagagctactccagctgagcgacagatggtattt
aatgaaattctacaggcagcctatcaattaatgacagatgtttttggaaactatgttata
cagaagttttttgaatttggaagtttggatcagaaattagccctggcgactcgtattcgc
ggtcatgttctaccattagccttgcagatgtatggctgccgtgttattcaaaaagcatta
gagtctatttcttctgatcagcaggtaattagtgaaatggtcaaggaactagatggtcat
gtacttaaatgtgtgaaagatcagaatggaaaccatgttgtacaaaaatgtattgaatgt
gttcagccacagtcactgcagttcatcattgatgctttcaaaggacaagtatttgtgctt
tcaacccatccttatggctgcagagtcattcagcgtatcttagagcactgcactgcagag
cagactttacccatcttagaagaacttcaccaacacacagaacagttggtacaggatcag
tatggcaattatgttattcagcatgtactggaacatggtcgacctgaagacaagagcaaa
attgtttctgaaattagaggaaaggtcttagccctgagtcaacacaaatttgccagcaat
gtagtagaaaagtgtgttactcatgcctcccgtgctgagagagctttactgattgatgag
gtctgctgtcagaatgatggtcctcacagtgccttatacaccatgatgaaggatcagtac
gccaactatgtggtacagaagatgatcgatatggctgaacctgctcagagaaagataatc
atgcacaagattcgacctcatattactactcttcgcaaatacacatatgggaagcatata
ctggccaagttggaaaaatactatttgaaaaacagcccagatctagggcctattggagga
ccaccaaatggaatgctgtaa
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integrated database retrieval system
