Arvicanthis niloticus (African grass rat): 117717163
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Entry
117717163 CDS
T08817
Symbol
Ttc6
Name
(RefSeq) tetratricopeptide repeat protein 6 isoform X1
KO
K24929
tetratricopeptide repeat protein 6
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
anu04990
]
117717163 (Ttc6)
Domain-containing proteins not elsewhere classified [BR:
anu04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
117717163 (Ttc6)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_17
TPR_11
TPR_8
TPR_16
TPR_9
TPR_14
TPR_12
TPR_19
ARM_TT21_N
TPR_CcmH_CycH
TPR_6
ANAPC3
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
117717163
NCBI-ProteinID:
XP_034370329
LinkDB
All DBs
Position
11:complement(11229750..11405114)
Genome browser
AA seq
1864 aa
AA seq
DB search
MSTIPKHFGLTAREESYMFKELEKIRQKTKKDCEQLRQRLAARPALNAAGFDDDDLDREK
GERAGTAGSSQAKKGHVSWEAKPSSGAPSGERPAAADLQGAPHSARGSPGKPPPFRPRDF
YMRSSAFRRHRPFKEAPAIAPQVGTTRPVILLRPRSRRKRLRGKAREAPVTKRVSKSPAH
GSPLLDMGHTRYRHPSSLSSLSSEAEDNARLRRLRIRTHFQREIMRWHHKPPSRSGREGS
STSQGTGPLQGGRYMPMNIDEIIASLQSEAQQASDQTIKELIQSILGQNYDIAMEDISLM
EQMYLRPSQAQLEVPQVEEEKKFLTDIKERPIVPSIYEELPETVSSIFQVEQEAAPEWGA
IEEEHSAFKSQEMLGAVPPPEASSKPLDSALPTSDVKQTRRPTLQEESTGIMQIRGKGVK
PTCKSKPTKPSKPRISVRSEEDKKLIKKIPEAHLLPHLHDLCTTVPSMELPVDLRLASRL
YHTADRKGHKAALELLGSSLLGGHCIDEQRERLIYGVPVMSEKQKYTGVTPVPAKKFPES
EQTNQWEASKASLQLSGEEVSAYPGTSKMFWNLTAPKFAIPESIMRETLYPKYESVQTSR
LLTEKLSETKESETILDTYTKRSFKSLIIKKSASYENIQKHSSAPYRRLKRSKSTVELSK
EGTPPPFIMKDDIDSNLEQLMYQKKKEVERQVAKQRALLDLTVKGSLESFPESDSLKCLS
FSLIEASRKAGISYIVFPIKKKKLLKKGSKFQKAAQVYEQLSRPPKKLERSLSHGVLPGE
RKYFLKVPLYERQIRCPSVPTLLDFDHFAQGRGGIPENVDPQKWALELFAKDKPHKTRTP
VAPSVQIDVPEPVIELSKLELSDHVPCNLPPAVIKYYESEVEKLTQEIKNEKRNPAFAYC
RRGAIYRKLGKLQSAMNDLQEAIFEEPLFLNAYWHRHFIYLFQDKINDALDDLNFINKYN
KNNAEAYLSKAEIFREKDITLAILNYSQAIKCRPKDANLYFKRGEMYEKTNKVLAIDDYS
KCIYYNPKRSDALWKRGMFYFENGNWIGAVYDFTSLLKLDPYNSYARTNRGRAYFKRNLY
KQATQDFSAAIHLDPNNWLALYYRACLFRKTSPSRALQDYSVSVLINDGYDNLNCFLHRG
ILYTQLKFWMLAVCDFETVVSLERTATLAYINIGLIYLQHLDNYTEAFWWFTEAIRVDPL
HIKSYICRAETYCKLHKLKKAVTELTRAIHLQPDAIHLYIIRGQYLLMLKNYDLAKFTIY
QVAEMNKGIIELTPIQEALIHSFCENHDKAIHILEGVIASKPDISTYALLANAQMKAKRI
KESVRLFKKALELYAFSDKGPVATSVLSECFYNLGLCYMEEGNFQMAFEAFTKAVKANPE
FAEAFYHRGLCKVKLNKQNSILDFNRALTLNPKHYQAYLSRVAYYGLKGRYSKAILNCNE
AIKLYPESVRAYICRGVLKYYNRNYKLAITDLSTAVNMDKNSYTAFYNRALCYTKIGEHQ
MALRDYGIVLLLDVGENIALNTFINRGLIYTELEQYGFALEDFKQAALINETNVNLCQAT
AMCYHRIKEFEGAVEFFTRAIKINPHYVDAYIGRGNSYMEYGQDEAMIQAQKDFLKALHT
DPSCLKARISLGYNLQAQGKFQKAWIHFTIGIETNPKSYLAYEGRAVVCLQMSNYFAAMQ
DINCAIKINSTAEFLTNRGVIHEFMGQRHSAMADYQAAISLDPNYSLAYFNAGNIYLHHR
QFSQASDYFSTALKINPENDYALMNRAVTNSVLKKYEEAERDFSHAMERCPHWAALYFNR
ASFHFYLKKYELAEKDLGIALSLKPDEAIMYNLRAQVRGKIGLIAEAMSDYNQALDLEEC
STAV
NT seq
5595 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccatcccaaagcacttcggcctgacagccagagaagaatcgtacatgttcaaa
gagctcgagaagattcgccagaagaccaagaaggactgtgaacaactcaggcagaggctg
gctgccaggccggctttgaatgcagcaggctttgatgatgatgatctggacagggagaag
ggagaacgcgcgggcacagcgggcagcagtcaggcgaagaaggggcacgtgtcctgggag
gccaagccgtcgtctggggcgccgagcggggagcgccccgccgcggccgacctgcagggg
gcgccgcacagcgcgcgaggcagccccgggaagccgccgccgttccgcccgcgggacttc
tacatgcggagctctgcgttccgccggcaccggcccttcaaggaggctccggccatcgcc
ccgcaggttggcaccacccgacccgtgatcctgctgcggccgcgctcgcgccggaagagg
ctgcgcgggaaggctcgggaggcgccggtgaccaagcgggtgtccaagagcccggcgcac
ggatcgcccttgctcgacatgggccacacccggtataggcaccccagctccttgtccagc
ctgagcagcgaggccgaggataacgcgcgcttgcgcaggctgcggattcgcacccacttc
cagcgcgagatcatgcggtggcaccacaagcccccgtccaggtccgggcgcgaggggagc
tccacgagccagggaaccgggcctctgcagggggggcgctacatgcccatgaacatagat
gagatcatcgcctctctgcagtccgaagcccagcaggcctcagaccagaccatcaaggag
ctcatacagagcatcctgggccagaactacgacatcgcaatggaagatatttctttgatg
gaacaaatgtacctcagaccatctcaggcacaacttgaagtaccccaggtggaggaagag
aaaaagttcctgacagatattaaggagcggccgattgtgccgagcatctatgaggaactc
cccgagacagtgtcaagcatcttccaggtggagcaggaggcggctccggaatggggagcc
atagaggaagaacactcagctttcaaatcccaggagatgttaggcgctgtaccaccgccg
gaggcctccagtaaacctctggacagtgcccttcccacaagtgatgtcaaacaaaccagg
cggccaactctacaagaggaatcaacaggaatcatgcaaatcagaggaaaaggagttaag
ccaacatgtaaaagtaaaccaactaagccgtcaaaaccaagaatatctgtaagatctgag
gaggataaaaaactaattaaaaaaatcccagaggctcatctccttccccatcttcatgac
ctgtgcaccacagtcccaagcatggaattgcctgtggatctgcgcctggcttctcgactg
taccacactgccgacaggaaaggccacaaggctgcacttgaactattggggtcgtctctt
ttaggtggtcactgtattgatgaacagagagaaagactgatatatggtgttcctgttatg
agtgagaagcagaaatatactggtgttactccagtgccagcaaaaaaattccctgaatca
gaacagacaaatcagtgggaagccagcaaagcaagtctgcagctctcaggagaagaagtg
tctgcatatcctggaacttcaaagatgttttggaatcttactgcacccaaatttgctatt
ccagaatcaatcatgagagaaacattatatccaaaatatgagagtgttcagacaagcaga
ctcttaactgagaaattatctgaaaccaaggagagtgagactattttagatacctacacc
aaaagaagttttaagtcattaataataaaaaaatctgcatcatatgagaatatccaaaaa
cattccagtgcaccatatagacggttaaagagatcgaagtctacagttgagttgagcaaa
gaagggaccccaccaccatttataatgaaggatgacatagacagcaacctggaacagctg
atgtaccagaagaagaaggaggtggagcgccaggtggccaagcaaagggcgttgcttgac
ctcaccgtaaaaggcagcctggaaagctttcctgagtcagacagcttaaaatgcctgtct
ttttctctcattgaagcatcaagaaaagctggcatcagctacattgtatttcctattaaa
aagaaaaaactgttgaagaaaggttctaagttccagaaggctgcacaagtgtatgaacag
ctctccaggcctccgaaaaaattagaaagatcactatctcacggagtacttcctggagag
agaaagtatttccttaaagttccattatatgagcgtcaaataaggtgccccagcgtgccc
acacttttagattttgatcattttgcccagggcagaggaggaataccagaaaatgttgat
cctcagaaatgggctcttgagttatttgctaaagacaaaccccacaaaacacgcacacca
gttgcaccatctgttcaaatagacgtcccggagccagtgatagagctttccaaactggag
ctaagtgatcacgtgccatgtaatcttccgcctgcggtgattaagtattatgaatctgaa
gtggaaaagttgactcaagaaataaaaaatgagaaaagaaatccagcatttgcgtactgt
agacggggagctatctatcgaaaactgggcaagttgcaaagtgccatgaacgacctacag
gaagccatattcgaggaaccattgtttctaaatgcctattggcacagacatttcatttat
cttttccaagacaaaattaatgatgctttggatgacttgaatttcataaataagtacaat
aaaaacaatgcagaggcatacttgtcaaaggcagagattttcagagagaaggatattaca
ttggcaattctgaattatagtcaagccattaaatgcaggcccaaagatgctaacctctat
ttcaagagaggggagatgtacgagaagacaaacaaagtcctggccattgatgactactca
aaatgtatttattataatccaaaaagatcagatgcgttgtggaaacgtgggatgttttac
tttgaaaatggaaactggattggagccgtatatgattttacatctctgttaaaacttgac
ccctataattcttatgcaaggacaaaccgggggagagcatattttaaaaggaatttatac
aagcaagcaacccaagacttttctgctgccatccacttagaccccaacaactggctagca
ctgtactaccgagcttgcttatttagaaagactagtccttccagagccctgcaggactac
agcgtgtcagttcttataaatgatggctatgataatcttaattgttttctacatcggggt
atactctacacacaactaaaattttggatgctggcagtttgtgattttgaaactgttgtt
tctctcgaaagaactgctactttggcttatataaatattggcctcatatacctgcagcac
ttggataattatactgaagccttttggtggtttactgaggcaattagagttgaccctctc
catatcaaaagctatatttgcagagcagaaacctattgtaagctgcataaactgaaaaag
gcagtaactgaattaactcgtgccatccatctccagcctgatgcaatccacctatatata
ataagaggacagtatcttcttatgctgaagaattatgatcttgcaaagttcactatttat
caagtagcagaaatgaacaaaggtatcattgagctgaccccaatacaggaagcgctcatt
cactcattttgtgaaaaccatgacaaggctattcatatcttggaaggggtcatagccagt
aaaccagacatttccacttatgcactcttggcaaatgcccaaatgaaggccaagagaatc
aaggaatctgtgagactatttaagaaggcattggaactgtatgcattttctgacaaagga
ccagttgccactagtgttttatcagagtgtttttataacctgggtctttgttacatggag
gaaggcaattttcaaatggcttttgaggctttcaccaaagctgtgaaagcgaatcccgaa
tttgcagaagctttttatcatcggggactttgtaaagtaaaactcaacaagcaaaactca
attctggactttaaccgggcacttaccctaaatcccaaacattaccaggcatatctaagc
cgagtagcttattatggtttaaagggcagatactccaaagccattctgaactgcaatgag
gccatcaaactttaccctgagagtgtgcgtgcctacatctgcagaggcgttctgaaatac
tacaacagaaattacaagctggctattacagatttatctacagctgtcaacatggacaag
aacagttatacagcgttttacaacagagccctgtgttacaccaagataggggaacatcag
atggctttaagagattatggaattgtactgcttcttgacgttggagaaaacatagcgtta
aataccttcattaaccgtggactcatctacactgaactagagcagtatggcttcgcacta
gaggattttaaacaagctgcactgataaacgagactaatgtgaacctttgtcaagctact
gccatgtgctaccacagaattaaagaatttgaaggagctgttgaattctttaccagagct
attaaaattaatccacattatgtggatgcttatattggacgggggaattcttacatggaa
tacggacaggatgaagctatgatccaagcccagaaggactttctgaaagcacttcatact
gacccatcatgtttaaaagccagaattagtctaggctataatttgcaggcccaaggaaaa
ttccagaaagcttggatacactttactattggcatagaaactaatccaaagagctatcta
gcctatgaaggacgagctgtggtttgtcttcaaatgagtaattactttgctgcaatgcag
gatatcaattgtgccataaagatcaattcgacagcagaattcctaacaaaccgtggcgtg
attcatgagtttatgggtcaacgacacagcgcaatggcagactatcaagcagcgatttct
ctggaccccaactactcgctcgcttactttaacgcgggaaacatctaccttcaccaccgg
cagttctctcaggccagcgactacttctcaacagccttgaagattaatccagaaaatgat
tatgctctcatgaatcgagctgttacaaactcagtattaaagaaatatgaagaagcagaa
agagatttttcacacgccatggaacgctgtccccactgggctgcactgtactttaataga
gcgagtttccatttctacttaaagaaatatgagcttgcagaaaaggaccttggcatagcc
ctgtctttgaagcccgatgaagctataatgtacaatctcagagcacaagttcgtggcaaa
ataggactgatagcggaagctatgagtgactataaccaagcccttgatcttgaagagtgc
tccacagcagtgtga
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