Arvicanthis niloticus (African grass rat): 117717304
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Entry
117717304 CDS
T08817
Symbol
Lrfn5
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
anu04990
]
117717304 (Lrfn5)
Domain-containing proteins not elsewhere classified [BR:
anu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117717304 (Lrfn5)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
Ig_DSCAM-DSCAML_C
fn3
C2-set_3
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
117717304
NCBI-ProteinID:
XP_034370534
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Position
11:complement(7637633..7917182)
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AA seq
764 aa
AA seq
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MEKFLFYLFLIGIAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLAD
NFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS
GLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH
NMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGIISPSTFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPALLTGRYFWSIPEEEFLCEPPLITRHTHEMRVLE
GQRATLRCKARGDPEPAIHWISPEGKLISNATRSLVYDNGTLDILITTVKDTGAFTCIAS
NPAGEATQTVDLHIIKLPHLLNSTNHIHEPDPGSSDISTSTKSGSNATSSNGDTKMSQDK
IVVAEATSSTALLKFNFQRNIPGIRMFQIQYNGTYDDTLVYRMIPPTSKTFLVNNLASGT
MYDLCVLAIYDDGITSLTATRVVGCIQFTTEQDYVRCHFMQSQFLGGTMIIIIGGIIVAS
VLVFIIILMIRYKVCNNNGQHKVTKVSNVYSQTNGAQMQGCSVTLPQSMSKQAMGHEENA
QCCKVASDNAIQSSETCSSQDSSTTTSALPPTWTSSAPVSQKQKRKTGTKPSAEPQSEAV
TNVDSQNTNRNNSTALQLASCPPDSVTEGPTTQRAHTKPSKFLTVPAEGPKSRHRSSVSG
GLKEYFHYGNSQKSWELSFKRSVSMNTMWSRHCISDICYGKVTI
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaattccttttttacctgtttctcattggcatagctgtgcgagctcagatctgt
ccaaagcgttgtgtctgtcagattttgtctcccaatcttgcaaccctttgtgccaagaaa
gggcttctatttgttccaccaaacattgacagaagaactgtggaactacggctggcagac
aattttgttaccaacatcaaaaggaaagattttgccaacatgaccagcttggtggacctg
actctatccaggaatacaataagttttattacaccccatgcttttgctgatctacgaaat
ttgagagcattgcatttgaatagcaacagattgactaaaattacaaatgatatgttcagt
gggctttcaaatctccaccatttgatattgaacaacaatcagctgactttaatttcttcc
acagcatttgacgatgtttttgctctcgaggagctggacctgtcctataataatctagaa
acgattccctgggatgctgtagagaagatggtgagcttgcacacccttagtttggatcac
aacatgattgacaacattcctaagggaactttctcccacttgcacaaaatgacgaggcta
gatgtaacatcaaataaactgcaaaagctgcctcctgatcctctctttcagcgagcacag
gtgctggccacctcaggaatcataagcccatcgacttttgcattgagttttggtggaaac
cccttgcattgcaattgtgagttgctgtggctgaggcgattgtcaagagaagatgacctt
gagacatgtgcttctcctgcacttttaactggccgttatttttggtcaatccctgaggaa
gagtttttgtgtgagcctcctctcattactcgtcatactcatgagatgagagtcttggag
ggtcaaagggcaacactgaggtgcaaagctagaggagaccctgaacctgctattcattgg
atttctcctgaagggaagctgatttcaaatgcaacaagatctctggtgtatgataatgga
acacttgatatccttataacaactgtaaaagacacaggagcttttacctgtattgcttcc
aatcctgcaggggaagcaacacaaaccgtggatcttcacataattaaactccctcaccta
ctaaacagcaccaatcatattcatgagcctgatcctggttcttcagatatctccacatcc
actaagtcaggttctaatgctaccagtagcaacggcgatacaaaaatgagtcaagataag
attgtggtggcagaagcaacttcgtcaacagcattacttaaatttaattttcaaagaaat
attcctggaatccgtatgtttcagatccagtacaatggtacttatgatgacacccttgtt
tacagaatgatacctcctacgagcaaaacatttttggtcaataatctggcttccggaact
atgtatgacttgtgtgtcttggccatatatgacgatggcatcacttctctcactgccaca
agagtcgtgggttgcatccagtttactacggaacaggattatgtccgttgccactttatg
cagtcccagtttttgggtggcaccatgattattatcattggtggaatcattgttgcatcc
gtgttggttttcatcatcatactaatgatccggtataaggtttgtaacaataacggccaa
cacaaggtcaccaaggttagcaacgtttattctcagactaatggggctcagatgcaaggc
tgcagtgtcacactgccccagtccatgtccaaacaagccatgggccatgaagagaatgcc
cagtgctgtaaagttgccagtgacaacgcgattcagtcttcagaaacatgttcgagtcag
gactcttccaccactacctctgctttgcctcctacctggacttcaagtgcgcctgtgtct
caaaagcagaaaagaaagactggcacgaagccaagtgctgagccgcagagtgaagctgtc
acaaatgttgactcccaaaacactaacaggaacaactcaactgccttgcagttagctagc
tgccctcctgattctgttacagaggggcccacaactcaaagagcacataccaagccaagt
aagtttctcactgtgcctgccgagggacctaaatccaggcacaggtcctccgtcagtgga
ggtttaaaggaatattttcactatggtaattcacagaagtcatgggagctgtcttttaag
agaagtgtgtctatgaatacaatgtggagtcggcactgcatttctgatatatgctacgga
aaagtaactatttga
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