Arvicanthis niloticus (African grass rat): 117717524
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Entry
117717524 CDS
T08817
Symbol
Psmd2
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 2
KO
K03028
26S proteasome regulatory subunit N1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03050
Proteasome
anu05010
Alzheimer disease
anu05012
Parkinson disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05017
Spinocerebellar ataxia
anu05020
Prion disease
anu05022
Pathways of neurodegeneration - multiple diseases
anu05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
117717524 (Psmd2)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
117717524 (Psmd2)
09164 Neurodegenerative disease
05010 Alzheimer disease
117717524 (Psmd2)
05012 Parkinson disease
117717524 (Psmd2)
05014 Amyotrophic lateral sclerosis
117717524 (Psmd2)
05016 Huntington disease
117717524 (Psmd2)
05017 Spinocerebellar ataxia
117717524 (Psmd2)
05020 Prion disease
117717524 (Psmd2)
05022 Pathways of neurodegeneration - multiple diseases
117717524 (Psmd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
anu03051
]
117717524 (Psmd2)
Proteasome [BR:
anu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
117717524 (Psmd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN1_RPN2_N
RPN1_C
PC_rep
THAP
Motif
Other DBs
NCBI-GeneID:
117717524
NCBI-ProteinID:
XP_034370647
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All DBs
Position
12:7838207..7849780
Genome browser
AA seq
908 aa
AA seq
DB search
MEEGGRDKTPVQSQQPSATAPSGADEKSSGKERRDAGEKDKEQELSEEDKQLQDELEMLV
ERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKC
FAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKAQ
REPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYSKVCLYLTSCVNYV
PEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGR
HGVFLELSEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG
SGSQVDSARMNLASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGVVLLW
DVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNTMRLG
SIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQ
TIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAY
AGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALI
AMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPE
VSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCP
YHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPL
PVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVIL
RKNPNYDL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggtggacgagacaagacacccgtgcagtcccaacaaccctcggcgacagcc
cccagcggcgcggacgagaagtcgagcggcaaggagcgaagggatgccggggaaaaagac
aaagagcaggagctgtctgaggaggacaaacagcttcaagatgaactggagatgctcgtg
gagcgactcggggagaaggatacatctctataccgaccagctctggaggaactgagaaga
caaattcgttcttctacgacttccatgacttcagtacccaagcctctcaaatttctgcgt
ccacactatggcaaactgaaggaaatctatgagaacatggcccctggggagaataagtgt
tttgctgctgacatcatctctgttttggccatgaccatgagtggtgagcgggagtgcctc
aagtatcggctggtgggctcccaggaagaattggcatcgtggggtcatgagtatgtcaga
catctggcaggagaagtggccaaggagtggcaggagctggatgatgcagagaaagcacag
cgggaaccattgcttaccttggtaaaggaaatcgtcccctacaacatggctcacaatgca
gagcatgaggcttgtgacctgctcatggaaattgagcaggtggatatgctggagaaagac
atcgatgagaatgcgtactccaaggtctgcctctatctcaccagttgtgtgaattatgta
ccagaacccgagaactctgccctcctgcgttgtgccttgggtgtgttccgaaagtttagc
cggttccctgaagctctgagattggcgctgatgctcaatgacatggaactggtagaagac
attttcacctcctgcaaggatgtggtggtccagaagcagatggcattcatgctgggtcgg
catggagtgttcctggagctgagtgaagatgtagaggagtatgaagaccttacagaaatc
atgtccaatgtccaactcaacagcaacttcttggccttagctcgggagctggacatcatg
gagcccaaggtgcctgatgacatctacaaaacccacctagagaataacaggtttggtggc
agtggctctcaagtggactctgcgcgaatgaacctagcctcctcttttgtgaatggcttt
gtgaatgcagcctttggtcaagataaactgctgactgatgatggcaacaaatggctttac
aagaacaaggaccatgggatgttgagtgcggctgcgtcccttggcgtggttcttctgtgg
gatgtggacggcggcctcacccagatcgacaagtacctctactcctctgaggactacatc
aagtcaggagctctccttgcctgtggtattgtgaactctggggtccggaatgagtgtgat
cctgccctggcactgctttcagactatgttctccataacagcaataccatgagactcggt
tccatctttgggctaggtttggcttatgccggctctaatcgggaagatgttctaacactg
ctgctacctgtgatgggagattccaagtccagcatggaggtagcaggtgtgacagctcta
gcttgtggaatgatagcagtggggtcttgcaatggagatgtcacttccaccatcttgcag
accatcatggagaaatctgagactgagctcaaagatacctatgctcgttggcttcctctt
ggcctgggcctcaatcacctggggaagggtgaagctattgaggcaatcctggctgccttg
gaggttgtgtcagagccattccgaagttttgccaacactctggtggatgtatgtgcctat
gcaggctctgggaatgtgctgaaggttcagcagctcctccacatctgtagtgagcacttt
gactctaaggaaaaagaagaagacaaagacaagaaggaaaagaaggacaaggacaagaag
gaagcccctgcggacatgggagcacatcagggtgtagctgttctggggattgcacttatt
gctatgggggaagagattggtgcagagatggcattgcgaacttttggtcacttgctgaga
tatggggagcctacccttcgtcgggctgtacctttagcactggcactaatctctgtttca
aatccacgactcaacatcttggatactctaagcaaattctctcatgatgctgatccagaa
gtttcctataactccatttttgctatgggcatggtgggcagcggtaccaataatgcccgt
ctggctgcaatgttgcgccagttagctcagtatcatgccaaggatcccaataacctcttc
atggtacgcttggcacagggcctgacacatttagggaagggcacactgaccctctgcccc
taccacagtgatcggcagctcatgagtcaagtagctgtggcaggactgctcactgtgctt
gtttctttcctggatgttcgaaacatcattctaggcaagtctcactatgtattgtatggg
ctggtggccgccatgcagcctcggatgctggttacatttgatgaggagttacgaccattg
ccagtttctgttcgtgtgggtcaggcagtggatgtggtaggccaggctgggaagcctaaa
acgataacgggcttccagactcatacaactccagtgttgttggcccatggggaaagggca
gaattggccactgaggagtttcttcctgttacccccattctggaaggttttgttattctt
cggaagaaccccaactatgatctttga
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