Arvicanthis niloticus (African grass rat): 117717561
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Entry
117717561 CDS
T08817
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117717561
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
117717561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
NBCH_WD40
HIRA_B
WDR90_beta-prop_4th
Mcl1_mid
WD40_like
Motif
Other DBs
NCBI-GeneID:
117717561
NCBI-ProteinID:
XP_034370690
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All DBs
Position
12:4678190..4759037
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AA seq
1015 aa
AA seq
DB search
MKLLKPTWVNHNGKPIFSVDIHPDGTKFATGGQGQDSGKVVIWNMSPVLQEDDEKDENIP
KMLCQMDNHLACVNCVRWSNSGMYLASGGDDKLIMVWKRATYIGPSTVFGSSGKLANVEQ
WRCVSILRSHSGDVMDVAWSPHDAWLASCSVDNTVVIWNAVKFPEILATLRGHSGLVKGL
TWDPVGKYIASQADDRSLKVWRTLDWQLETSITKPFDECGGTTHVLRLSWSPDGHYLVSA
HAMNNSGPTAQIIEREGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSAKPSCPYCCC
AVGSKDRSLSVWLTCLKRPLVVIHELFDKSIMDISWTLNGLGILVCSMDGSVAFLDFSQD
ELGDPLSEEEKSRIHQSTYGKSLAIMTEAQLSTAVIENPEMLKYQRRQQQQQLDQKNATT
RETSSASSVMGVVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSTAFFN
SIPLSSSLAGTMLSSPSGQQLLPLDSSTPSFGASKPCTEPVAATSARPTGESVSKDSMNA
TSTPAALSPSVLTTPSKIEPMKAFDSRFTERSKATPGAPSLTSVIPTAVERLKEQNLVKE
LRSRDLESSSDSDEKVHLAKPSSLSKRKLDLEVETVEKKKKGRPRKDSRLLPMSLSVQSP
AALSAEKEAMCLSAPTLALKLPIPGPQRAFTLQVSSDPSMYIEVENEVTAVGGIRLSRLK
CTREGKEWETVLSSRVLTAAGSCDVVCVACEKRMLSVFSTCGRRLLPPILLPSPISTLHC
TGPYVMALTAAATLSVWDVHRQVVVVKEESLHSILSGSDMTVSQILLTQHGIPVMNLSDG
KAYCFNPSLSTWNLVSDKQDSLAQCADFRNSLPSQDAMLCSGPLAIIQGRTSNSGRQAAR
LFSVPHVVQQETTLAYLENQVAAALTLQSSHEYRHWLLLYARYLVNEGFEYRLREICKDL
LGPVHCSTGSQWESTVVGLRKRELLKELLPVIGQNLRFQRLFTECQEQLDILRDK
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttgaagccaacctgggtcaaccacaatgggaagccgattttttcagttgat
atacaccctgatgggaccaagtttgcaactggaggacaagggcaggattctgggaaggtt
gtgatctggaatatgtctccagtcctccaggaggatgacgagaaggatgaaaatattccc
aagatgctttgccagatggacaatcacttagcatgtgtgaactgtgtgcggtggtcaaac
agtgggatgtatttagcttctgggggagatgacaaactgattatggtgtggaagcgggct
acgtacattgggcccagtactgtgtttggctccagtggtaagcttgccaatgtggagcaa
tggcggtgtgtctccatcctccggagtcactcaggcgatgtgatggatgtagcatggtct
ccccatgacgcctggctggcctcatgcagcgtggataacactgtcgtcatttggaatgcc
gtgaagttcccagaaattcttgcaactctgagaggtcattcaggcttagtgaaaggtttg
acttgggaccccgttggtaaatatattgcctctcaagctgatgaccgaagtctgaaggta
tggaggacgctggactggcagctagagactagcatcaccaaaccttttgatgagtgtgga
ggaacgacgcatgtgctccggcttagttggtcacctgatggccattatctggtatctgcc
catgccatgaataattctggtcctactgctcagatcatcgaacgagagggctggaagacc
aacatggacttcgtgggtcaccggaaagctgtgactgttgtgaaattcaacccaaaaatc
tttaagaagaagcagaagaatgggagttctgcaaagcccagctgcccatactgctgctgt
gctgttggcagcaaggaccgctcactttctgtctggctcacatgtttgaaacggcctctg
gttgtcatccatgagctgtttgacaagtccatcatggatatttcctggactctgaatggg
ttgggtatcctggtgtgctccatggacggctctgtggcgttccttgatttctctcaggat
gaacttggagaccccctgagtgaggaggaaaagagccgaattcaccagtccacctatggc
aagagcctggcaataatgactgaggcccagctttccacagctgttattgagaaccctgag
atgctcaagtaccagcggagacagcaacagcagcagctggatcagaagaatgccaccact
agggagacaagctcagcatcctcagtcatgggtgtggtcaatggggaaagtctagaagat
atcagaaagaatcttttgaagaaacaagtggaaacacggacagcagatggtcggaggagg
atcacgcctctttgcatagcacagctggacactggggacttctccacggcattcttcaac
agcatccctctctccagctccctagcaggcaccatgctctcctctcctagtggtcagcag
ctactgccactggactccagtaccccctccttcggcgcctcaaagccttgcacagaacca
gtggcagccaccagtgccaggcctacaggcgagtctgtcagtaaggacagtatgaatgct
acctctactcctgctgcattgtcaccctctgtgttaacaaccccatccaagattgaaccc
atgaaagcatttgattcccggttcacagagcggtccaaagccacaccaggtgctccttcc
ttgaccagcgtgattccgacagctgttgaaaggttgaaagagcagaaccttgtcaaggag
ctgaggtcccgggatctggagagcagtagtgacagtgacgagaaggtccacctggccaag
ccctcctcactgtccaagcgcaaacttgatcttgaggtagagacggtggaaaagaagaag
aaaggtcgccctaggaaggattctcgtcttttgcccatgtctctgtccgtccagtctcca
gctgccctgtctgcagagaaggaggccatgtgtctgtctgcaccaacacttgcactgaag
ctgccaatcccaggcccgcagagagcgttcaccctccaggtgagctctgatccctccatg
tacattgaggtggagaatgaagtgaccgctgttggggggataaggctgagtcgcctgaag
tgcacccgtgaagggaaggagtgggagacagtgctcagcagccgcgtcctcactgctgcc
ggcagctgtgatgtggtatgtgttgcctgtgaaaagaggatgctgtcggtgttctctacc
tgtggtcgccgtctcctccctcccatcctccttccatctccaatctccactttgcactgc
acaggcccctacgtcatggcactcaccgctgcagccacactgtctgtctgggatgtccac
agacaggtggttgtggtgaaagaagaatctctacactccatcttgtcaggaagtgatatg
acggtgtcacagatcttgctaacacagcatggaatcccagtgatgaatttgtctgatggg
aaagcatactgctttaatccatccctttccacatggaacctggtttctgacaagcaagat
tcactggcccagtgtgcagacttcaggaacagcctgccatcccaggatgccatgctgtgt
tcaggaccgttagccataattcagggccgcacctccaactctggaaggcaagctgcccgg
ctcttctccgtgcctcatgtggtacagcaggagaccacactggcctacctagagaaccag
gttgctgcggcacttaccctgcagtccagccacgagtatcgtcactggctcctcctctac
gctcggtaccttgtgaatgaagggtttgaataccgcctccgagaaatatgcaaggacttg
ctgggtccagttcactgctccactggaagtcaatgggagtcaacagtagtgggtctgcgg
aaaagggagctgctgaaggaacttctgccagtcatcgggcagaatcttcgattccagcgc
ctctttactgagtgccaggaacaactggatatcctgagagacaagtag
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