Arvicanthis niloticus (African grass rat): 117717636
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Entry
117717636 CDS
T08817
Symbol
Robo1
Name
(RefSeq) roundabout homolog 1
KO
K06753
roundabout, axon guidance receptor 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04360
Axon guidance
anu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117717636 (Robo1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
117717636 (Robo1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117717636 (Robo1)
Cell adhesion molecules [BR:
anu04515
]
Immunoglobulin superfamily
ROBO family
117717636 (Robo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
FN3_DSCAM-DSCAML_C
Unc5_NetrinR_N
Ig_PDGFR_d4
Pur_ac_phosph_N
DUF7908
Big_4
Motif
Other DBs
NCBI-GeneID:
117717636
NCBI-ProteinID:
XP_034370765
LinkDB
All DBs
Position
12:55469840..55915344
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AA seq
1698 aa
AA seq
DB search
MVRRPARGSVCCRKGKEDVCCVLSLCVFLSHVDLLVSGHAVIEMATTVTSVTPSAALVLF
PTDPEDLERGTDNGTPAPTSDNDDNSLGYTGIFSAVEAADPSLNGSRLRQEDFPPRIVEH
PSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIV
HGRKSRPDEGVYICVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQP
PRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEV
AELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDH
TLKIRKVTAGDMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCE
ATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTVTNVQRSDVGYYICQTLNV
AGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLILSCVATGSPAPTILWRKDGV
LVSTQDSRIKQLESGMLQIRYAKLGDTGRYTCTASTPSGEATWSAYIEVQEFGVPVQPPR
PTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAEN
VKTETFAVKGLKLNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQREL
GNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGASHGESEWLVFEVRTPTK
NSVVIPDLRKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPRSVTVSKNDGNGTA
ILVTWQPPPEDTQNGMVQEYKVWCLGNETKYHINKTVDGSTFSVIIPSLVPGIRYSVEVA
ASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMV
FSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPATQ
PWLADTWPNTGNNHNDCSINCCTAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLP
ESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQANLSNNMNNGSGD
SSEKHWKPPGQQKQEVAPIQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSS
DRGSSTSGSQGHKKGARTPKAPKQGGMNWADLLPPPPAHPPPHSNSEEYSMSIEESYDQE
MPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQP
MLQDCPEDIGHMPHPPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDE
ADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSS
DGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAA
VIQKARPTKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVQSKAQLEVRPVMVPKLAS
MEARTDRSSDRKGGSYKGREALDGRQVTDLRTNPGDPREAQEQPNDGKGRGAKAAKRDLP
PAKTHLAQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNMAEMQIL
GGFERGDENNEELEETES
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggagacctgcacggggctcagtgtgctgcaggaagggcaaggaagacgtgtgc
tgtgtgttgtccttgtgtgtctttctgtcacatgtggatttacttgtgtctggacatgct
gtgatcgaaatggcaactactgttacttctgtgaccccatcagcagctctggtgttgttt
ccgacagaccctgaggacctagagagggggaccgacaacgggacgccagcccccacctct
gataatgatgacaattcgctgggctacacagggatcttctcagctgtagaggctgcagac
ccttctcttaatggctcccgtcttcgtcaggaagattttccaccgcgcattgttgaacac
ccttcagacctgatcgtctccaaaggagaacccgccactctgaactgtaaagctgaaggc
cgccccaccccaactatagaatggtacaaaggcggggaaagagtggagacggacaaagat
gaccctcgctcacaccggatgctgctgccaagtggatctttatttttcttacgcatagtc
catggacggaagagtaggcctgacgaaggggtgtacatctgtgtagcaaggaattacctt
ggagaggctgtgagccacaacgcgtcgctggaggtagctattctacgggatgacttcaga
caaaacccttcagatgtcatggtggcggtaggtgagcctgcagtaatggaatgccagcct
cctcgaggccatccagaacccaccatctcctggaaaaaggatggctcacccctagatgat
aaagatgaacgaatcactatacggggaggaaagctcatgatcacttacacccgtaaaagc
gacgctggcaagtatgtttgtgttggtaccaacatggtgggggaacgggagagcgaagtc
gcagagctaaccgttttagagagaccatcatttgtgaagagacccagtaatttggcagtg
actgtggatgacagtgcggaatttaaatgtgaggcccgaggagaccctgtgcctacagtt
cgatggagaaaagacgatggagagctgcccaaatccagatatgaaattcgagatgatcat
actttgaaaatccggaaggtgacggctggcgacatgggatcctacacgtgtgtggcagaa
aatatggttgggaaagctgaggcatccgccactttgacagttcaagagccaccacatttt
gttgtcaagcctcgtgaccaggtggttgccttgggacgcactgtgacttttcagtgtgaa
gcaactggaaatcctcaaccagctatcttttggaggagagaggggagtcagaatctgctt
ttctcataccagcctccacagtcctctagccggttttcagtttcacagacaggagacctc
actgttacgaacgtccagcggtctgatgtcggttactacatctgtcagactttaaatgtt
gctggaagtatcatcacaaaggcatatttggaagttactgatgtgattgcagatcggcct
cccccagtcatccgacaaggtcctgtgaatcagactgtagcagtggatggtactttaatc
ctcagctgtgtggctacaggcagtccagcgcccacaattctgtggaggaaggatggagtc
cttgtttcaacccaagattctcggatcaaacagctggagagtggcatgctgcagatccgc
tacgctaagctgggtgacacgggccggtacacctgcactgcatcgaccccaagtggtgag
gccacgtggagcgcttacatcgaagtccaggaatttggagttccagttcaacctccaaga
cccaccgaccccaatttaatccccagtgccccctcaaagccggaagtgacagatgtcagc
agaaacacggtaactttatcgtggcagccaaacttgaactcgggagcaaccccgacatct
tatattatagaagccttcagccatgcatctggcagcagctggcagaccgtggcagaaaat
gtgaaaacagaaacatttgcggtcaaaggactcaaactgaacgccatttacctcttcctg
gtgagggcggccaatgcgtatgggattagtgatccaagccaaatatcggatccagtgaaa
acgcaagatgtcccaccaaccagccaaggggtggaccacaagcaggtccagagagaactg
gggaatgttgtcttgcatctccacaacccgaccatcctttcttcctcctcagtcgaagtg
cactggacggtggaccaacaatctcagtatattcaagggtataaaattctctaccggcct
tctggagcaagccatggtgaatcggagtggttagtttttgaagtgaggaccccaactaaa
aacagcgtggtgatccctgatctcagaaaaggcgtcaactacgagattaaggctcgcccc
ttctttaatgagtttcaaggagcagacagtgaaatcaaatttgccaaaaccttagaagaa
gcaccaagtgcccctccccgaagtgtaactgtatccaagaatgatggaaatgggactgca
attctggtcacttggcaaccgcctcctgaagacacacagaatgggatggtccaagaatat
aaggtttggtgtctcggtaatgaaactaagtatcacataaacaagacagtagatggctct
accttctctgtgatcatcccctctctggttcctgggatccggtacagtgtggaggtggca
gcaagcactggggctggtcctggggtgaagagtgagcctcagttcatccaattagattct
catggaaaccccgtgtctcccgaggaccaagtaagcctggcccagcagatctcagatgtg
gtgaagcagccagcattcattgcgggcatcggggcagcctgttggattatcctcatggtc
ttcagcatctggctctacagacaccgaaagaagagaaatgggctgaccagcacatacgcg
ggtatcaggaaagtcccgtcctttaccttcacaccaacagtaacttatcaaagaggaggc
gaagccgtcagcagtggagggaggccgggactcctcaacattagtgaacctgccacgcag
ccatggctggcagacacatggcccaacacaggcaacaatcacaacgactgctccatcaac
tgctgcacagccggcaacggtaacagcgacagcaacctgacaacctacagtcgcccagct
gattgtatagcaaattataacaaccagctggataacaaacaaacaaacctgatgctccct
gagtcaactgtttatggtgatgtggaccttagtaacaaaatcaatgagatgaaaaccttc
aatagcccaaatctgaaggacgggcgttttgtcaatccatcagggcagcccactccctac
gccaccacgcagctcatccaggccaacctcagcaacaatatgaataatggcagtggggac
tccagcgagaagcactggaagcctccgggacagcagaaacaggaagtggcaccaattcag
tataacatcatggagcaaaacaagctgaacaaagattatcgggcaaatgacacaatccct
ccaaccatcccgtacaaccaatcctatgaccagaatacaggaggatcttacaacagctcg
gatcggggcagtagtacatctgggagtcaaggccacaagaaaggggcacggacaccaaag
gcacccaagcagggtggcatgaactgggcagacttgctgccccctcctccggcgcatcct
cccccacatagcaacagcgaagaatacagcatgtctatagaggaaagctatgatcaagaa
atgccctgtcctgtgccacctgcgcggatgtatttgcaacaggatgaattagaagaagag
gaagatgaaagaggccccacgccccctgtccggggggcagcttcttctccagctgctgtg
tcctacagccatcagtccacggccactctcaccccttctccccaggaagagctccagcct
atgttacaggattgtccagaagacatcggccacatgccccacccaccagacaggaggcgg
cagcccgtgagtcctcctccaccaccacggccaatttccccacctcatacttacggctac
atttcaggaccccttgtctcagatatggataccgatgccccagaagaggaggaggacgaa
gctgacatggaagttgccaaaatgcagacgcgaaggctcttgttacgtgggcttgagcag
accccagcatccagtgttggggaccttgagagctccgtcactgggtccatgatcaatggc
tggggctcagcctcagaagaggacaacatttccagtgggcgctccagtgtcagttcatcg
gatgggtcctttttcacggatgctgattttgcccaggcagttgctgcagccgcggagtat
gcaggcctgaaagtggctcgccgccaaatgcaagatgctgctggccgccggcacttccat
gcctctcagtgcccgaggcccacgagtcctgtgtctacagacagcaacatgagtgctgct
gtaatccagaaagccagacccaccaagaaacaaaaacaccagccgggacatctgcgcaga
gaagcctacacagatgatcttcctccccctccagtgccaccgcctgctataaaatcgccc
actgtccagtccaaggcacagctggaggtacgacctgtgatggtgccaaaactcgcttct
atggaagcaagaacagacaggtcatcagacagaaaaggaggcagttacaaggggagagaa
gctctggatggaagacaagtcactgacctgcgaacaaatccaggtgaccccagagaagca
caggaacagccaaatgatgggaaaggacggggagcaaaggcagcaaagcgagaccttccg
ccagcaaagacgcacctcgcccaagaggatattcttccgtactgtagacctacattccca
acgtcaaacaaccctagagatcccagttcctcaagctcaatgtcatcaagagggtcaggg
agccgacaaagggagcaagcaaatgtgggccgaaggaatatggcggagatgcaaatactt
gggggatttgaaagaggagatgagaataatgaagaattagaggaaactgaaagttga
DBGET
integrated database retrieval system
