Arvicanthis niloticus (African grass rat): 117717703
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Entry
117717703 CDS
T08817
Symbol
Paxbp1
Name
(RefSeq) PAX3- and PAX7-binding protein 1
KO
K13211
GC-rich sequence DNA-binding factor
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117717703 (Paxbp1)
Spliceosome [BR:
anu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117717703 (Paxbp1)
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Gene cluster
GFIT
Motif
Pfam:
GCFC
CytoC_RC
Motif
Other DBs
NCBI-GeneID:
117717703
NCBI-ProteinID:
XP_034370875
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Position
12:complement(72358201..72388613)
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AA seq
916 aa
AA seq
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MFRKARRVNVRKRNDSEEEERERDEEQEPPPLLPPPASGEEPGPGGGDRAPAGESLLGPG
PPPSAHTPGLGAEAGGGIPGGAEPGNGLKQRKRPRENKEVPRASLLSFQDEEEENEEVFK
VKKSSYSKKIVKLLKKEYKEDLEKSKIKTELNTTADSDQTLDKTCHAKDTNPEDGVVVSE
HGEDEMDMESEKEEEKPKAGGAFSNALSSLNVLRPGEIPDAAFIHAARKKRQLARELGDF
TPHDSEPGKGRLVREDENDASDDEDDDEKRRIVFSVKEKSQRQKIAEEIGIEGSDDDALV
TGEQDEELSRWEQEQIRKGINIPQVQASQPTEVNMYYQNTYQTMPYGASYGIPYSYTAYG
SSDAKSQKTDNTVPFKTPSNEMAPVTIDLVKKQLKDRLDSMKELHKTNRQQHEKHLQSRV
DSTRAIERLEGSSGGIGERYKFLQEMRGYVQDLLECFSEKVPLINELESAIHQLYKQRAS
RLVQRRQDDIKDESSEFSSHSNKALMAPNLDSFGRDRALYQEHAKRRIAEREARRTRRRQ
AREQTGQMADHLEGLSSDDEETSTDITNFNLEKDRILKESSKVFEDVLESFYSIDCIKAQ
FEAWRSKYYTSYKDAYIGLCLPKLFNPLIRLQLLTWTPLEAKCRDFENMLWFESLLFYGC
EEREQEKDDVDVALLPTIVEKVILPKLTVIAENMWDPFSTTQTSRMVGITLKLINGYPSV
VNAENKNTQVYLKALLLRMRRTLDDDVFMPLYPKNVLENKNSGPYLFFQRQFWSSVKLLG
NFLQWYGIFSNKTLQELSIDGLLNRYILMAFQNSEYGDDSIRKAQNVINCFPKQWFVNLK
GERTISQLENFCRYLVHLADTIYRNSIGCSDVEKRNARENIKQIVKLLASVRALDHAVSV
ASDHNVKEVKSLIEGK
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgttccgaaaggcccggcgggtgaacgtgcgcaagcggaatgactcggaggaggaggag
cgggagcgcgatgaggagcaggagccgccgccgttgctgccgccgccggcctcaggcgaa
gagccgggccccggcggcggcgaccgggcccccgcgggggagtcgctcctgggcccgggg
ccgccgccctccgcgcacaccccgggccttggcgccgaggccgggggcggcatccccggc
ggcgcggagcccggcaacgggctgaagcagcgcaagaggcctcgcgagaacaaagaggtg
cccagggccagcctgcttagcttccaggacgaggaggaagaaaatgaagaagtgttcaaa
gtaaagaaatcaagttacagcaaaaagatcgtcaaattgcttaagaaagaatataaagaa
gaccttgagaaatcaaaaatcaagacagagctcaacacaacagctgacagtgaccagact
ctggacaaaacgtgtcatgctaaggacacaaacccagaagatggagttgttgttagcgag
catggcgaggatgaaatggacatggagagcgagaaggaggaggagaagcccaaggccggg
ggcgccttctccaatgctctgtcttccctgaatgtgcttcgcccaggagaaattccagat
gcagcttttatacatgctgcaagaaaaaaacgccaactggcccgggaactgggagacttc
actcctcatgacagtgaacctggtaaaggccgcctcgttcgagaggatgagaatgatgcc
agcgacgatgaggatgatgatgagaaacgccggatcgttttttctgtgaaggaaaagtca
caaagacaaaagatcgctgaggagataggtattgaggggagtgacgatgatgccttagta
actggagagcaagatgaagaactcagccgctgggagcaggagcagattagaaagggaatt
aacatccctcaggttcaagcaagtcagcccactgaagtgaatatgtactaccagaatact
taccagacaatgccttatggtgcatcctatggcataccttatagttacacagcctatgga
tcatcagatgccaagtctcaaaaaacagataatacagtccctttcaaaactcccagtaat
gagatggctcccgttactattgatttggtaaagaaacagcttaaagacaggttggactcc
atgaaagaattgcacaaaaccaatcgacagcagcatgaaaaacatctgcaaagccgagtg
gactccaccagggctattgagagattagaagggtcttctgggggtattggtgaacggtat
aaatttttgcaagaaatgcgagggtatgtccaagacttgcttgagtgtttcagtgaaaag
gtgccactgattaatgaacttgaatcagcaatacatcagctgtacaaacagcgagcttcc
cgccttgtccaaagacgacaagatgatattaaagatgaatcttcggagttttcaagccat
tcaaataaagctttgatggcaccaaatcttgattcctttggacgtgaccgggcactttat
caagaacatgcaaaacgtcggattgcagagcgggaagccaggaggactcgacgtagacaa
gccagagagcagaccggccagatggcggaccaccttgaaggcctttccagtgatgatgaa
gagacctctacagacattactaacttcaatctggagaaagatcgaattttgaaagagtct
agcaaagtttttgaagacgtccttgagagtttctattcaattgactgcattaaagcgcag
tttgaagcatggcgttcaaaatactacacgtcctataaggacgcttacattggtctttgt
ttgccaaaactgttcaaccctctaatcagacttcagctcctcacctggactcctcttgag
gcaaaatgccgtgactttgaaaatatgctgtggtttgaatctctgctgttttatggttgt
gaagaacgagaacaagagaaggatgatgttgatgttgccctgctgcccaccattgtggag
aaggtcattcttcccaagctgacagtgatagctgaaaacatgtgggatcccttttctaca
acacagacttcaaggatggttggaatcacactgaaattaataaatggctatccttcagta
gtcaatgcagaaaataaaaacacacaggtataccttaaagcccttttattgaggatgaga
agaactttagacgatgatgtgttcatgcccctatatcccaaaaatgtcttagaaaataaa
aattctgggccttacttattttttcaacgacagttttggtcttctgtcaagctattggga
aactttcttcagtggtatggcattttctcaaacaaaactcttcaagagttatcaatagac
ggcttgttaaacagatacatcctcatggcttttcagaactcagaatacggagatgacagc
atcagaaaagcccaaaatgtaatcaactgtttccctaaacagtggtttgtgaatctgaaa
ggagaaagaacaatttctcagttagaaaatttttgccgatatcttgtacatttagcagat
acaatttataggaacagtatcgggtgctctgatgtggaaaaaagaaatgcaagggaaaat
ataaagcagatagtaaaacttcttgcaagtgtccgggctttggatcatgcagtatctgtt
gcaagtgatcataatgtgaaagaagtcaagtctctgattgaagggaaatag
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