Arvicanthis niloticus (African grass rat): 117717707
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Entry
117717707 CDS
T08817
Symbol
Lsamp
Name
(RefSeq) limbic system-associated membrane protein isoform X1
KO
K06772
limbic system-associated membrane protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117717707 (Lsamp)
Cell adhesion molecules [BR:
anu04515
]
Immunoglobulin superfamily
IgLON family
117717707 (Lsamp)
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_5
Izumo-Ig
V-set_CD47
Ig_PDGFR_d4
C2-set_2
Zwei_Ig_N
Ig_6
C2-set_3
Ig_C17orf99
Sp38
TraK_N
Motif
Other DBs
NCBI-GeneID:
117717707
NCBI-ProteinID:
XP_034370877
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All DBs
Position
12:26420529..28459640
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AA seq
378 aa
AA seq
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MRTYWLHSVWVLGFFLSLFSLQVLAFWNQPPAEVNLSPITIPGLPVRSVDFNRGTDNITV
RQGDTAILRCVVEDKNSKVAWLNRSGIIFAGHDKWSLDPRVELEKRHALEYSLRIQKVDV
YDEGSYTCSVQTQHEPKTSQVYLIVQVPPKISNISSDVTVNEGSNVTLVCMANGRPEPVI
TWRHLTPLGREFEGEEEYLEILGITREQSGKYECKAANEVSSADVKQVKVTVNYPPTITE
SKSNEATTGRQASLKCEASAVPAPDFEWYRDDTRINSANGLEIKSTEGQSSLTVTNVTEE
HYGNYTCVAANKLGVTNASLVLFKRVLPTVPHPIQEIGTTVHFKPKGPGSVRGINGSISL
AVPLWLLAASLFCLLSKC
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaggacctactggctgcacagcgtctgggtgctggggttcttcctgtccctcttctca
ttgcaagtcctggcattttggaaccagcctcctgctgaagtaaatttgtctccaatcaca
atcccaggactgcccgttcgcagcgtggattttaaccgaggcacggacaacatcaccgtg
aggcagggggacacggccatcctcaggtgtgtggtagaagacaagaactcgaaagtggcc
tggttgaatcgctctggcatcatcttcgctggacatgacaagtggtctctggaccctcgg
gttgagctggagaaacgccatgctctggaatacagcctccgaatccagaaggtggatgtc
tatgatgaaggatcctacacatgctcagttcagacacagcatgagcccaagacctcccaa
gtttacttgatcgtacaagttccaccaaagatctccaacatctcctcggatgtcactgtg
aatgagggcagcaatgtaaccctggtctgcatggccaatgggcgccctgaacctgttatc
acctggagacaccttacaccacttggaagagaatttgaaggagaagaagaatatctggag
atcctaggcatcaccagggaacagtcaggcaaatatgagtgcaaggctgccaacgaggtc
tcctcggcggatgtcaaacaagtcaaggtcactgtgaactatccacccactattacggag
tctaagagcaacgaagccaccacaggacgacaagcttccctcaaatgtgaggcctcagct
gtgcctgcacctgactttgagtggtaccgggatgacaccaggataaacagtgcaaatggc
cttgagattaagagcactgagggccagtcctctctgacagtgaccaatgtcactgaggaa
cactatggcaactatacctgcgtggctgccaacaagctcggcgtcaccaatgccagccta
gtccttttcaagcgtgttttacccacagtcccccaccccattcaagaaattggcaccacc
gtacacttcaagccaaaaggacccgggtcggtgagaggaatcaacggatccatcagtctg
gccgtaccactgtggctgctggcagcgtccctgttctgccttctcagcaaatgttaa
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