Arvicanthis niloticus (African grass rat): 117717727
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Entry
117717727 CDS
T08817
Symbol
Ccdc50
Name
(RefSeq) coiled-coil domain-containing protein 50 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117717727 (Ccdc50)
Membrane trafficking [BR:
anu04131
]
Autophagy
Other autophagy associated proteins
Others
117717727 (Ccdc50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
DUF1462
Motif
Other DBs
NCBI-GeneID:
117717727
NCBI-ProteinID:
XP_034370936
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All DBs
Position
12:14230447..14286286
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AA seq
480 aa
AA seq
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MADVSVDQSKLPGVKEVCRDFAVLEDHTLAHSLQEQEIEHHLASNIQRNRLVQHDLQVAK
QLQEEDLKAQAQLQKRYKALEQHDCEIAQEIQEKLTIEAERRRIQEKKDEDIARLLQEKE
LQEEKKRKKHTPEFSGGSAYGDNYYYEDGDQSRSRRDRELGSGHSKFCRLQNNGKTTKQK
EKPRHQQENLEDLEEYHTSERSLPSASLGRGRDDAQTVCEQQERKRSSQERLWKSPLPKI
RGEVFLSTDSEDWEANCSLRTRSWEKQSRQHGRHSPKSSQKPGLPCKEIVYGRDLGQGEH
REMRHRPRTSPFSEDKELRHHRVAGMKPRGIKEAVSTSAQASHRDQEWYDAEIARKLQEE
ELLATHVDMRAAQVAQDEEIARLLMAEEKKAYKKAKEREKSSLDKRKHDPECKSKGKSTH
SKSKEGDETHRSKIDRPSRPLPPTGMGPEDMEPSHFTNQHSGARHFPKSESSHKGFHNKQ
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtgagtgtggatcagtccaagttgccgggcgtgaaggaagtgtgtcgagat
tttgcagtcctggaggaccacaccctggctcatagcctgcaagaacaagagattgaacat
catttggcatccaatattcagcggaatcgtctggtacagcatgatctgcaggttgctaag
cagctccaagaggaagacctcaaagcccaagctcagctccagaagcgctacaaagccctt
gagcaacatgattgtgaaattgctcaggaaatccaggagaagctgacaattgaggctgag
agacgacgcattcaggagaagaaggatgaggacatagcacgccttttgcaagagaaggaa
ctacaggaagagaaaaagaggaagaaacacactccagagttttctgggggcagtgcttat
ggagataactactattatgaggatggagaccagtcaaggtcaaggagggacagggaactg
ggttctggacactcaaagttttgtagactccaaaacaacgggaagactacaaagcagaag
gagaaaccaaggcatcaacaggagaacttggaagacctggaagaataccatacatcagag
agatccctgccttctgctagcttgggcagagggagggatgatgcccagactgtctgtgaa
cagcaggaaagaaagcggtctagtcaggagaggctctggaaatctccacttccgaagatc
cgcggggaggtatttttgagcactgactctgaagactgggaagctaactgtagccttaga
actcggagttgggaaaaacagtctcgacagcatggcagacattcacccaagtcttcacag
aaaccaggacttccctgtaaggaaattgtatatgggagggaccttgggcaaggtgaacac
agagaaatgagacataggcccaggacttctcccttctcagaggataaagaacttcgccac
caccgtgttgcaggaatgaaaccaagaggaataaaagaagctgtctctacttcagcacaa
gcaagccacagggaccaggagtggtatgatgctgaaattgcccggaagttgcaagaggaa
gaacttttggctactcatgtggacatgagagcagctcaggttgcccaggatgaggaaatt
gctcgacttctgatggctgaagaaaaaaaagcttacaagaaagccaaagagcgagaaaag
tcatctttggacaaaaggaaacatgaccctgagtgcaagtcaaaaggaaagtcgacacac
tcaaagtcaaaagagggtgatgaaacacaccgttccaagattgacaggccgtcgagacca
ctgccacctacagggatgggccctgaggacatggagcccagccattttacaaaccagcac
agtggtgcacgtcattttccaaagtctgagtcctcgcataaaggcttccataataagcag
taa
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