Arvicanthis niloticus (African grass rat): 117717774
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Entry
117717774 CDS
T08817
Symbol
Gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03022
Basal transcription factors
anu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117717774 (Gtf2e1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
117717774 (Gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
117717774 (Gtf2e1)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
117717774 (Gtf2e1)
Prokaryotic type
Archaeal type
TFE
117717774 (Gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
117717774
NCBI-ProteinID:
XP_034371037
LinkDB
All DBs
Position
12:complement(24085257..24117627)
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AA seq
438 aa
AA seq
DB search
MADPDVLTEVPAALKRLAKYVIRGFYGIEHVLALDILIRNPCVKEEDMLELLKFDRKQLR
SVLNNLKGDKFIKCRMRVETAADGKTTRHNYYFINYRTLVNVVKYKLDHMRRRIETDERN
STNRASFKCPVCCSTFTDLEANQLFDPMTGTFRCTFCHTEVEEDESAMPKKDARTLLARF
NEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQSKDRAATAAGAAGLAGGHHKEAWT
SKGPSYEDLYTQNVVINMDDQDDVHRTSLEGKSAKERPIWLRESTVQGAYSSEEMKEGGI
DVDTFQEREEARAGPDDNEEVMRALLIHEKKTSSATAGSVGAAAPVTAANGSDSESETSE
SDDDSPPRPAASAPPHRDEDEDDDEFEEVADDPIVMVAGCPFSYSEVSQRPELVAQMTPE
EKEAYIAMGQRMFEDLFE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcagacccagatgttctcactgaagttccagcagcattgaagcggttagccaagtat
gtcatccggggcttttatggcattgagcatgtgctggccttggacatcttgatccggaac
ccctgtgtgaaagaggaggacatgctggagctgctcaagtttgatcggaagcagcttcga
tctgttctgaataacttaaagggagacaagttcatcaaatgcagaatgagggtagagact
gctgcagatgggaagacgacccgccataactactacttcatcaattaccgcacccttgtc
aatgtagtgaaatataagctggaccacatgagaaggaggattgaaacagatgagagaaat
tccaccaatcgggcttccttcaaatgtcctgtctgctgcagcactttcactgacttagag
gctaatcagctgtttgaccccatgacaggaactttccgctgcaccttttgccatacagag
gtagaagaagatgaatcagcaatgcccaaaaaagatgctcgcacacttttggcaagattt
aatgaacaaattgagcccatttatgcattgcttcgagagacagaggatgtaaacttggcc
tacgaaatacttgaaccagaacccacggaaatcccagccctgaagcagagcaaagaccga
gcagcaactgctgctggagctgccggcctggcaggtgggcaccacaaggaggcgtggacc
agcaaagggccctcctatgaagacttgtatactcagaatgttgtcattaacatggatgac
caagatgatgtgcatcgcacctcgctggaagggaaatctgccaaagagagacccatttgg
ttgagagagagcactgttcaaggggcatacagttctgaagagatgaaggaaggtggcatc
gatgtggacacgtttcaggagcgcgaggaagcccgtgcggggcctgatgacaacgaggag
gtcatgcgggctctgctcattcatgagaagaagacttcttcggcgacagctggctccgtg
ggagcagccgctccggtgactgctgctaatggcagtgactctgagagtgagaccagtgag
tcagacgatgactctccaccccggccagctgcctcggctcctcctcatcgtgatgaagac
gaggacgacgatgagtttgaggaagtagcagatgaccccattgttatggtggctggctgt
ccattctcctacagtgaagttagccagcggccagagctggtagcccagatgacaccggaa
gagaaggaagcatacatagccatgggtcagcgtatgtttgaggatctctttgagtga
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