Arvicanthis niloticus (African grass rat): 117717795
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Entry
117717795 CDS
T08817
Symbol
Smpd4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00600
Sphingolipid metabolism
anu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117717795 (Smpd4)
Enzymes [BR:
anu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
117717795 (Smpd4)
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GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
117717795
NCBI-ProteinID:
XP_034371075
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All DBs
Position
12:3356208..3381484
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AA seq
823 aa
AA seq
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MAFPHLQQPSFLLASLKADSINKPFAQRCQDLVKVIEDFPAKELHAIFPWLVESIFGSLD
GVLVGWNLRCLQGRVNPVEYSIAMEFLDPSGPMMKLVYKLQAEDYNFDFPVSCLPGPVKA
SIQENVLPDSPLYHNKVQFPPTGGLGLNLALNPFEYYMFYFALSLISQKPMPMSLHVRTS
DCAYFILVDRYLSWFLPTEGSVPPPLCSSPGGSSPSPAPRTPAMPFASYGLHTSLLKRHI
SHQTSVNADPASHEIWRSETLLQVFVEMWLHHYSLEIYQKMQSPHAKLEVLHYRLNVSSA
LHSPAQPSLQALHAYQESFTPTEEHVLVVRLLLKHLHAFANSLKPDQASPSAHSHATSPL
EEFKRAAVPRFVQQKLYVFLQHCFGHWPLDASFRAVLEMWLSYLQPWRYAPEKQAQGSDS
QPRCVSEKWGSFIQENLLMYTKLFVSFLNRALRTDLVSPKNALMVFRVAKVFAQPNLTEM
IQKGEQLFLEPELIIPHRQHRLFTVTTSFLSPWPPVVTDASFKVKSHVYSLEGQDCKYTP
MFGPEVRTLVLRLAQLITQAKQTAKSISDQYVESPAGRSFLSWLGFGSTDTNSCYPANDL
DEMGQDSIRKTDEYLEKALEYLRQIFRLSEAQLAQLTLALGSARDENGKQQLPDCIVGEE
GLILTPLGRYQIINGLRKFEIEYQGDLELQPIRSYEITSLVRALFRLSSAINRRFAGQMA
ALCSRNDFLGSFCRYHLTEPTSSNRHLLSPVGRRQVTNPARGPRLSLRFLGSYRTLLLLL
MAFFVASLFCIGPLPCSLLLVLGYILYAIAMTLLTERGKLHQL
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggcgttccctcacttacaacagcctagtttcctcctggctagcctgaaagctgactct
ataaataagccctttgctcagcgttgccaagatttggtgaaagtcattgaggattttcca
gccaaggaattgcatgccatcttcccatggctggtggagagcatctttggcagcctggac
ggtgtccttgttggttggaatcttcgatgcctacagggacgtgtgaaccctgtggagtac
agcatagcaatggaatttctagacccaagtggcccaatgatgaagctggtttataagctt
caagctgaagactataactttgactttcctgtctcctgtcttcctggccctgtgaaggca
tccattcaagagaatgtactccctgacagtcctctgtaccacaacaaggtccagtttccc
ccaaccggaggccttggtctgaacctggccctcaatccattcgaatactatatgttctac
tttgctttgagcctcatctctcaaaagccaatgcctatgtccctccatgttcgtacttcg
gactgtgcctatttcatcctggtggacaggtacctatcgtggttcctgcccactgaaggc
agtgtgcctccaccactctgctccagtccaggaggctccagcccctcaccagctcccagg
acaccagccatgccttttgcctcctatggcctccacactagcctcttgaagcgacacatc
tctcatcagacatctgtgaatgcagaccctgcatcccatgagatctggcggtcagaaact
ctcctccaggtttttgtggaaatgtggcttcatcattactccctggagatttatcaaaaa
atgcagtcccctcatgccaagttggaggttctgcactaccgactcaatgtctccagcgcc
ctccacagccctgcccaacccagcctccaggccctccacgcctatcaagagtccttcacg
cctactgaggagcacgtgctggtggtccgccttctgctgaagcacctgcatgcctttgcc
aacagtctgaagccagaccaggcttcaccatcagcgcactcccatgccaccagtcccctg
gaggaattcaaacgggctgcagtgcctcggtttgtccagcagaagctgtatgtcttcctg
cagcactgttttggccactggcctctggatgcatccttcagagctgtcttggagatgtgg
ctgagctacctgcagccatggaggtatgcccccgagaaacaggctcagggcagtgattcc
cagccacggtgtgtgtcggagaagtggggatccttcatccaggaaaacctgctgatgtac
accaagctgttcgtgagtttcctgaaccgtgccctacgcacagaccttgtcagccccaag
aacgcactcatggtcttccgagtggccaaggtctttgcccagcccaacctgactgagatg
atccagaaaggtgagcagctgttcctggagccagagctcatcattccccaccgccaacat
cggctcttcacagttacaaccagctttctgtcaccgtggccccctgttgtgacagatgcc
tcattcaaagtgaagagccatgtctacagcctggagggccaagactgcaaatatacccca
atgtttggtcctgaagtccgaaccctggtattgcgccttgctcagctcatcacacaggcc
aagcagactgccaagtctatctccgatcagtatgtggagagcccagctggccgctccttc
ctgtcatggctgggctttggctccacagacacgaatagctgctacccagccaatgacctg
gatgaaatgggtcaggacagcatccgcaagacagacgagtacctagagaaggccctggag
tacctgcgccaaatattccggctcagcgaagcccagctggctcagctcacacttgccctg
ggaagtgctcgggacgagaatgggaagcagcagctcccagactgcattgttggggaagaa
ggactcatccttacacccttgggccgatatcagatcattaatggtctgcgaaagttcgag
attgagtaccagggggacttagagctgcagcccatcaggagctatgaaatcaccagtctg
gtccgtgcgctcttccggctgtcttctgccatcaaccgcagatttgcaggccagatggca
gctctgtgttcccggaatgatttccttggcagcttctgtcggtaccacctcactgagcct
acctcgagcaacagacacctgctgagccctgtaggacggaggcaggtcaccaaccctgca
cggggccccaggctcagcctccgtttcctgggcagttaccggacactgcttctgctcctg
atggccttctttgtggcttctctgttctgcattgggcccctgccctgctccttactcctg
gtcctaggatacatcctctatgccatagctatgacactactcactgagcgggggaaactg
caccagttgtga
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