Arvicanthis niloticus (African grass rat): 117717806
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Entry
117717806 CDS
T08817
Symbol
Runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04530
Tight junction
anu04659
Th17 cell differentiation
anu05200
Pathways in cancer
anu05202
Transcriptional misregulation in cancer
anu05220
Chronic myeloid leukemia
anu05221
Acute myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117717806 (Runx1)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
117717806 (Runx1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117717806 (Runx1)
05202 Transcriptional misregulation in cancer
117717806 (Runx1)
09162 Cancer: specific types
05221 Acute myeloid leukemia
117717806 (Runx1)
05220 Chronic myeloid leukemia
117717806 (Runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117717806 (Runx1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
117717806 (Runx1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
117717806
NCBI-ProteinID:
XP_034371092
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All DBs
Position
12:complement(73982503..74085957)
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AA seq
451 aa
AA seq
DB search
MRIPVDASTSRRFTPPSTALSPGKMSEALPLGAPDGGAALASKLRSGDRSMVEVLADHPG
ELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNA
TAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHR
QKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQM
QDARQIQPSPPWSYDQSYQYLGSITSSSVHPATPISPGRASGMTSLSAELSSRLSTAPDL
TAFGDPRQFPTLPSISDPRMHYPGAFTYSPPVTSGIGIGMSAMSSASRYHTYLPPPYPGS
SQAQAGPFQTGSPSYHLYYGASAGSYQFSMVGGERSPPRILPPCTNASTGAALLNPSLPS
QSDVVETEGSHSNSPTNMPPARLEEAVWRPY
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatccccgtagatgccagcacgagccgccgcttcacgccgccttccaccgcgctg
agccccggcaagatgagcgaggcgctgcctctgggcgccccggatggcggcgccgccctg
gccagcaagctgaggagcggcgaccgcagcatggtggaggtactagccgaccaccccggc
gagctagtgcgcaccgacagccccaacttcctctgctccgtgctgccaactcactggcgc
tgcaacaagaccctgcccatcgctttcaaggtggtagcgctgggggacgttccggatggc
actctggtcaccgtcatggcaggcaacgatgagaactactcggcagagctgagaaatgct
acggcagccatgaagaaccaggtggcgagattcaacgacctcaggtttgtgggtcggagt
ggtagaggcaagagcttcactctgaccattaccgtctttacaaacccaccacaagttgcc
acctaccacagagccatcaaaatcacagtggacggccccagagaaccacgaagacatcgg
cagaaactagatgatcagaccaagcccgggagtttgtccttttccgagaggctcagtgaa
ctggagcagctgcggcgcacggccatgagggtcagcccgcaccacccagcccccacgccc
aaccctcgggcctccttgaaccactccactgcctttaaccctcagcctcaaagtcagatg
caggatgccaggcagatccagccgtccccaccgtggtcctatgatcagtcctaccagtac
ctgggatccatcacctcttcttctgttcacccagcgacacccatctcaccaggccgtgcc
agcggcatgaccagcctctctgcggaactttccagtcgactctcaacggctccggacctg
acagccttcggcgacccgcgccagttccccacgctgccgtccatctccgacccgcgcatg
cactacccaggcgccttcacctactcgccgccggtcacgtcgggcatcggcatcggcatg
tcagccatgagctcggcctctcgctaccacacctacctgccgccgccctaccccggctcc
tcgcaggcgcaggccgggcccttccagaccggctcgccctcctaccacctgtactacggc
gcctcggccggctcctaccagttctccatggtgggcggcgagcgatcgcccccgcgcatc
ctgccaccctgcaccaacgcgtccacgggcgccgcgctgctcaaccccagcctccccagc
cagagcgacgtggtggagaccgagggcagccatagcaactcgcccaccaacatgcccccc
gcgcgcctggaggaggccgtgtggcggccctactga
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