Arvicanthis niloticus (African grass rat): 117717971
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Entry
117717971 CDS
T08817
Symbol
Rcan1
Name
(RefSeq) calcipressin-1 isoform X1
KO
K17901
calcipressin-1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04919
Thyroid hormone signaling pathway
anu04921
Oxytocin signaling pathway
anu05167
Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09152 Endocrine system
04921 Oxytocin signaling pathway
117717971 (Rcan1)
04919 Thyroid hormone signaling pathway
117717971 (Rcan1)
09160 Human Diseases
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
117717971 (Rcan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117717971 (Rcan1)
Membrane trafficking [BR:
anu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
117717971 (Rcan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calcipressin
Motif
Other DBs
NCBI-GeneID:
117717971
NCBI-ProteinID:
XP_034371368
LinkDB
All DBs
Position
12:complement(73767658..73849758)
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AA seq
251 aa
AA seq
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MEDGVAGSRLGEVAEAVEARAPRRVTLRPFAPFSAAAEGDEGGGGDWSFIDCEMEEVDLQ
DLPSATIACHLDPRVFVDGLCRAKFESLFRTYDKDITFQYFKSFKRVRINFSSPLSAADA
RLRLHKTEFLGKEMKLYFAQTLHIGSSHLAPPNPDKQFLISPPASPPVGWKQVEDATPVI
NYDLLYAISKLGPGEKYELHAATDTTPSVVVHVCESDQENEEEEDEVERMKRPKPKIIQT
RRPEYTPIHLS
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggaggacggcgtggccgggtcgcggctcggagaggtggcggaggcggtcgaggcgcgg
gcgccccgcagggtgactctgaggcccttcgcgcccttctccgcggctgccgagggggac
gagggcggcggcggcgactggagcttcatcgactgcgagatggaggaggtggatctgcag
gacctgccgagcgccaccatcgcctgccacctggacccgcgcgtgttcgtggatggcctg
tgccgggccaaatttgaatccctcttcaggacgtatgacaaggacatcaccttccagtat
tttaagagcttcaaacgcgtccgaatcaacttcagcagccccttatccgcggccgacgcc
aggctgcggctgcacaagaccgagttcctggggaaggaaatgaagttatattttgctcag
actttacacataggaagttcacacctggctcctcccaatccagacaaacagtttctcatc
tctccacctgcttctccacccgttggctggaaacaagtagaagatgctaccccagtcata
aattacgatcttttatatgctatctccaagttggggccaggagagaagtacgagctgcat
gcagcgacggacaccacccccagtgtggtggtccatgtgtgtgagagcgaccaagagaat
gaggaggaggaggacgaggtggagagaatgaagagacccaagccaaaaatcatccagact
cggagaccagagtacacacccattcacctcagctga
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