Arvicanthis niloticus (African grass rat): 117718184
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Entry
117718184 CDS
T08817
Symbol
Chrd
Name
(RefSeq) chordin isoform X1
KO
K04657
chordin
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
117718184 (Chrd)
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Gene cluster
GFIT
Motif
Pfam:
CHRD
VWC
Motif
Other DBs
NCBI-GeneID:
117718184
NCBI-ProteinID:
XP_034371616
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All DBs
Position
12:7916938..7925751
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AA seq
949 aa
AA seq
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MPSLPAPPAPRLLLGLLLLGSRPAGGTGPEPPSLPIRSEKEPLPVRGAAGCSFGGKVYAL
DETWHPDLGEPFGVMRCVLCACEAPQWARRGRGPGRVSCKNIKPQCPTLACRQPRQLPGH
CCQTCPQERSNLDPQPAGLVFEYPRDPEHRSYSDRGEPGVGERTRADGHTDFVALLTGPR
SQAVARARVSLLRSSLRFSISYQRLDRPSRVRFTDPTGNILFEHPAAPTQDGLVCGVWRA
VPRPSVRLLRAEQLRVALVTPTHPSGEVWGPLIWQGALAAETFSAILTLEDPQQWGVGGI
ALLTLSDTEDSLHFLLLFRGLLGGLAQVPLKLQILHEGQPLRELQANTSAQEPGFAEVLP
SLTDQEMGWLVLGELQMVLEQASGPELRISGYITTRQSCDVLQSVLCGADALIPVQTGAA
GSASFILLGNGSLIYQVQVVGTGSEVVAMTLETKPQRKNQRTVLCHMAGLQLGGHMAVGM
CSGLGARGAHMLLQNELFLNIGTKDFPDGELRGHVTALCYSGHSARYDRLPVPLAGALVL
PPVRSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQGTVTAHLLGPPGMPGPQRLLKGFYG
SEAQGVVKDLEPVLLRHLAQGTASLLITTKNSPRGELRGQVHIASQCEVGGLRLASEGVR
MPLSSNGEAAMSPILPAGPGPEAPVPAKHGSSGRPRDPNTCFFEGQQRPHGARWAPNYDP
LCSLCTCQRRTVICDPVVCPPPSCPHPVQALDQCCPVCPEKQRSRDLPSLPHLEPGEGCY
FDGDRSWRAAGTRWHPVVPPFGLIKCAVCTCKGATGEVHCEKVQCPRLACAQPVRANPTD
CCKQCPVGSGTHAKLGDPMQADGPRGCRFAGQWFPENQSWHPSVPPFGEMSCITCRCGAG
VPHCEREDCSLPLSCGSGKESRCCSHCTAQRSASETRTLPELEKEAERS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcctcccggccccgccggccccgcggctgctcctcgggttgctgctgctcggc
tcgcggccggccggtggcactggccctgagcccccctcactgcccatccgttccgagaag
gagccgctgcctgtccggggagcggcaggctgctccttcggcgggaaggtctatgccttg
gacgagacgtggcacccggacctgggggagccttttggggtgatgcgctgcgtgctgtgc
gcctgtgaagcgcctcagtgggctcgccgtgggaggggccctggcagggtcagctgcaag
aacatcaaacctcagtgccccaccctggcctgcaggcagccgcgccagctgccaggacac
tgctgccagacctgcccgcaggagcgcagcaatttggatccacagcccgctggcctggtc
ttcgagtatccaagagacccagagcatcgcagttacagcgatcggggggaacccggcgtt
ggggagcggacacgtgctgatggccacacggacttcgtggcgctgctgacaggaccgagg
tcgcaggcggtagctcgtgctcgagtctctctgctgcgttcaagtttacgcttctctatc
tcctaccagcggctggaccgtcccagcagggttcggttcacagatcccacaggcaacatc
ctgtttgaacaccctgcagcccccacccaggatggcctggtctgtggggtatggcgggca
gtacctcgaccgtctgtgaggctcctgagagcagagcagctgcgtgtagcccttgtgaca
cccacccacccttcaggagaagtctgggggcctctcatttggcagggtgctctcgctgcg
gagaccttcagtgccatcctgaccctggaagacccacagcagtggggtgtggggggcata
gccctgctcactctcagtgacacagaagattccttacattttttgctgctcttccggggt
ctgctgggaggactagctcaggttcccttgaagcttcaaattctccacgaggggcagcca
cttcgagagctccaggccaacacctcagctcaggagccaggttttgctgaggtgctgccc
agccttacagaccaagagatgggctggttggtgctgggggagctgcagatggtcctagag
caggcaagtgggccagagctacgcatcagcggatacattactaccaggcagagctgtgat
gtccttcaaagtgtactttgtggggctgatgccctgatcccagtccagacgggtgccgct
ggctcagccagcttcatactgctaggaaatggctcccttatttatcaggtgcaagtggta
ggtacaggtagcgaggtggtggccatgacactggagaccaagcctcagcggaagaaccag
cgcactgtcctgtgccacatggctggactccagctgggaggacacatggctgtgggtatg
tgctctgggctgggtgcccgaggggctcacatgctgctacagaatgagctgttcctgaat
attggtaccaaggacttcccagatggagagcttcgggggcatgtgactgccctatgctac
agtgggcacagtgcccgctatgacagattgcctgtgcctctggcaggagcactagtgctg
ccccctgtgcggagtcaggcagcagggcatgcctggctctccttggatacacattgtcac
ttacactatgaggttctattggctgggcttggtggctcagagcaagggactgtcactgct
cacctcctcgggcctcctgggatgccaggaccccagcggctgctgaagggattctatggc
tcagaggctcagggtgtggtaaaggatctggagcctgtgctgctgcggcacctggcacag
ggcactgcctccctgctgatcaccaccaagaatagccccagaggagaattacgtggtcag
gtgcacattgccagtcagtgtgaggtgggaggcctgcgcctggcctcagaaggagtgcgg
atgcccttgtcttcaaatggagaggcagctatgtcacccattctgcctgctgggcctggc
cccgaagccccagtaccagccaaacatggcagctctgggaggccccgagatcctaacaca
tgtttcttcgaggggcagcagcgtccccacggggctcgctgggcacccaactatgaccca
ctctgctctctctgcacctgccagagacgaacagtgatctgtgatcctgtagtatgccca
ccaccaagctgtccccacccggtgcaggcactggaccagtgctgtcccgtgtgtccagag
aaacaacgcagtagagaccttcccagcctaccacatctagagccaggagaaggctgctat
tttgatggcgaccggagctggagggcagcgggtacccgatggcaccctgtcgtgcccccc
tttggcctaattaagtgtgctgtctgcacctgcaagggggccacgggagaggtgcactgt
gagaaggtgcagtgtcctcgcctggcctgtgctcagcccgtccgtgccaaccccaccgac
tgctgcaaacagtgtccagtagggtcagggactcatgccaagctgggagaccccatgcag
gctgatgggcctcgtgggtgtcgctttgctgggcagtggttcccagagaatcagagctgg
cacccatcagtgcccccctttggggagatgagctgtattacctgcagatgtggggcaggg
gtacctcactgtgaacgggaagattgttcgttgccactatcctgcggctcagggaaggag
agtcgatgctgttcccactgcacagcccaaaggtcagcctctgagactagaacccttcca
gagctggagaaagaagctgaacgctcctag
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