Arvicanthis niloticus (African grass rat): 117718190
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Entry
117718190 CDS
T08817
Symbol
Abcf3
Name
(RefSeq) ATP-binding cassette sub-family F member 3
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
anu03012
]
117718190 (Abcf3)
Translation factors [BR:
anu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
117718190 (Abcf3)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
NACHT
AAA_16
AAA_29
MMR_HSR1
AAA
RsgA_GTPase
AAA_15
DUF1672
AAA_23
Dynamin_N
DUF87
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
117718190
NCBI-ProteinID:
XP_034371630
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All DBs
Position
12:7741021..7753372
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AA seq
709 aa
AA seq
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MATCADILRSEFPEIDGQVFDYVTGVLHSGSADFESVDDLVEAVGELLQEVSGDSKDDAG
IRAICQRMYNTLRLAEPQNQGNSQVLLDAPIQLSKIMENYDCDTRLPGLLKKEQSSTVNA
KKLEKAEARLKAKQEKRSEKETLRTSSPLVLEEASASQAGSKKESRLESSGKNKSYDVRI
ENFDVSFGDRVLLAGADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSLRVPAHISLLHVE
QEVAGDDTPALQSVLESDTIREDLLRQERELSLKIAAGRAEGSEAAQLADVYAKLEEIEA
DKAPARASVILAGLGFTPKMQQQPTREFSGGWRMRLALARALFARPDLLLLDEPTNMLDV
RAILWLENYLQTWPSTILVVSHDRNFLNAIATDIIHLHSQRLDGYRGDFETFIKSKQERL
LNQQREYEAQQQYRQHIQVFIDRFRYNANRASQVQSKLKMLEKLPELKPVDKESEVVLKF
PDGFEKFSPPILQLDEVDFYYDPKHVIFSRLSVSADLESRICVVGENGAGKSTMLKLLMG
DLAPVRGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGVS
GELAMRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGHALNSFRGGV
ILVSHDERFIRLVCKELWVCEKGSVTRVEGGFDQYRALLQEQFRREGFL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttgcgccgatatcctgcggagcgagttcccagaaattgacgggcaggtcttc
gactacgtgaccggtgtcttgcacagtggcagcgcggatttcgagtcagtggatgacctg
gtggaagctgtcggggaactgttgcaagaagtgtccggggacagcaaggatgacgcgggc
attagggctatctgtcagcgcatgtacaacactctacgcctggctgaaccgcagaaccag
ggaaacagccaggtgctactggacgcccccatccagttgtcgaagataatggaaaactac
gactgtgacaccagacttccaggattgctaaagaaggaacagtcctcgacagtgaatgcg
aagaaactagagaaggctgaagctcgactgaaggcaaagcaggagaagcgctcagagaag
gaaacgctgaggaccagcagccctctagtcttggaggaagcgtccgctagccaggcaggc
agcaagaaagagagccggttagaatcatccggcaagaacaagtcctatgatgtgcgaatt
gagaactttgatgtctcttttggggacagggtcctgctggctggggctgatgtgaacttg
gcatggggccgacgctacgggctggtgggacgcaatggtctggggaagacgacattgcta
aagatgctggccacccggagcttgcgtgttccagcccatatttccctcctgcacgtggag
caggaagttgctggagacgacactcctgccctgcagagtgtgctggagagtgacaccata
cgagaggacctgctacggcaggaacgggaactcagcctcaagattgctgcgggcagggca
gaaggttcagaagctgcacagctggcagacgtctacgcaaagctggaggagattgaagca
gacaaggcacctgccagagcatcagtcattcttgcgggtcttggctttacccctaaaatg
cagcagcagcctaccagggagttctcaggaggctggagaatgagattggccttagcccgg
gctctctttgccaggccagaccttctgctgttagacgagcccacaaacatgctggatgta
agggccatcctgtggttggagaattacctgcagacgtggccctccactatcctagttgtc
tctcatgaccgaaacttcctgaatgccattgccacagacatcatccacttgcacagccag
cggctggacggttaccgaggagactttgaaaccttcatcaagagcaagcaggaacggcta
ctcaaccagcagcgcgagtatgaggcacagcagcagtatcgccaacacatccaggttttc
atcgaccgtttcagatacaatgcaaacagagcctctcaagtgcagagtaaactgaagatg
ttggagaagctgcctgaactaaaaccggtggacaaggagtcagaggtggtgttgaagttc
cctgacggctttgagaagttctcaccgccaattctgcagctagatgaggtggatttctac
tatgatcctaaacacgtcatcttcagtcgcctgtctgtctctgctgatcttgagtcccgc
atctgtgtggttggggagaatggggctgggaaatctactatgctgaagctgctcatgggg
gacctggctcctgttcggggtatcaggcacgcccacaggaatctgaagatcggctatttt
agccagcaccacgtggagcagctagacttgaatgtcagtgctgtggaactcctggctcga
aaatttcctgggcgacctgaagaggaatatcgtcaccagttaggccggtatggcgtctct
ggagaactggccatgcgccctgttgcaagcttatctgggggccagaagagccgggtagcc
tttgctcagatgaccatgccttgccccaacttctatattctggatgaacccacgaaccat
ctggacatggagacaattgaagctttgggccatgctctcaacagcttcaggggtggtgtc
attctggtatctcacgatgagcgcttcatccgcctggtgtgcaaggagctgtgggtgtgc
gagaaaggcagtgtcactcgggttgagggaggatttgaccagtaccgggccctcctccaa
gaacagttccgccgggagggctttctctag
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