Arvicanthis niloticus (African grass rat): 117718299
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Entry
117718299 CDS
T08817
Symbol
Synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00562
Inositol phosphate metabolism
anu01100
Metabolic pathways
anu04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
117718299 (Synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
117718299 (Synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117718299 (Synj1)
Enzymes [BR:
anu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
117718299 (Synj1)
Membrane trafficking [BR:
anu04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
117718299 (Synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
RRM_1
Motif
Other DBs
NCBI-GeneID:
117718299
NCBI-ProteinID:
XP_034371770
LinkDB
All DBs
Position
12:complement(72284673..72355061)
Genome browser
AA seq
1570 aa
AA seq
DB search
MAFSKGFRIYHKLDPPPFSLIVETRHKEECLMFESGAVAVLSSAEKEAIKGTYAKVLDAY
GLLGVLRLNLGDTMLHYLVLVTGCMSVGKIQESEVFRVTSTEFISLRVDASDEDRISEVR
KVLNSGNFYFAWSASGVSLDLSLNAHRSVQEHTTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIYLD
DCVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGFEANAPAFDRHFRTLKDLYGKQIVVN
LLGSKEGEHMLSKAFQSHLKASEHASDIHMVSFDYHQMVKGGKAEKLHSVLKPQVQKFLD
YGFFYFDGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLAKQLEALGLAEKPQLVTR
FQEVFRSMWSVNGDSISKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAID
VLLLGNTLNSDLADKARALLTTGSLRVSEQTLQSASSKVLKNMCENFYKYSKPKKIRVCV
GTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMVELNA
GNIVNASTTNQKLWAVELQKTISRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDT
VKTGMGGATGNKGAVAIRMLFHTTSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGR
MLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQIFRGFLEGK
VTFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKI
LYTWTPGTLLHYGRAELKTSDHRPVVALIDIDIFEVEAEERQKIYKEVIAVQGPPDGTVM
VSIRSSAQENTFFDDALIDELLQQFAHFGEVILIRFVEDKMWVTFLEGSSALNVLSLNGK
ELLNRTITITLKSPDWIKNLEEEMSLEKISVTLPSSTSSTLLGEDAEVAADFDMEGDVDD
YSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTVPEYSAPALPVRPSRAPSRTPG
PLSSQVSPVDTQPAAQKDSSQSIEPKRPPPPRPVAPPARPAPPQRPPPPSGARSPAPARR
EFGGVGAPPSPGVARREMEAPKSPGTARKDNIGRNQPSPQAGLAGPGPAGYGAARPTVPA
RAGVISAPQSQARASAGRLTPEGQSKPSEPSKGPAVLPEPLKPQAAFPLQPSLPTPAQKL
QDPLVPIAAPMPPSGSQPNLETPPQPPPRSRSSQSLPSDSSPQLQVKTNGVSGVKQEPTL
KSDPFEDLSLSVLAVSKAQPSVQISSVLTPDPKMLIQLPSASQSKLNSLSSISCMPSMPP
VPEQSKSQESMGSSANPFPSLPRRNPFTDRTAAPGNPFRVQSQESEATSWLVKEEPAPNS
PFPPLMPLSHDTSKPSSSLDGFEDNFDLQRQSTVKTSNPKGWVTFDEDDDFPTTGKSKSV
YPELLDNVPASFDDDWSKGTSVSFCVLPARRPPPPPPPPVPLLPPGTTSSAGPSTALPSK
ASSTLDFTER
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttagcaaaggatttcgaatctaccacaaattggatcccccaccgttcagcctc
atagtggaaactaggcataaggaagaatgtctaatgttcgagtctggggctgtggctgtg
ctctcatctgcagaaaaggaggctattaaaggcacatatgccaaagtactggatgcatat
ggacttctgggagttttacgattaaatcttggtgataccatgctgcattatctagtccta
gtcactggatgcatgtctgttgggaaaattcaagagtctgaagttttccgagttacttcc
actgagtttatatcacttcgagttgatgcttcagatgaggaccgcatttcagaagtacgg
aaagttttgaactcaggaaacttttactttgcatggtctgcatctggagtcagcttagat
ctgagtctgaatgcacatcgaagcgtgcaagagcacacaactgacaataggtttttctgg
aatcagtctttgcatttgcatctcaagcactatggtgtgaattgtgatgactggttgcta
cggctcatgtgtggaggcgtggagattaggacaatctatgctgcccataaacaggcaaaa
gcttgcctcatttcaaggctaagctgtgaacgagctgggacaaggttcaacgtccgggga
acaaatgatgatggccatgttgccaactttgtagaaacagagcaggttatatacttagat
gactgtgtttcttccttcatacaaatccgaggatctgttccattgttctgggagcaacca
gggttgcaagtgggatcccatcgtgttcggatgtcaagaggttttgaagccaatgcgcct
gcatttgacaggcatttccgaacacttaaggacttatatggtaaacaaatagtagtaaat
ctgcttggatctaaggaaggtgagcatatgctgagcaaggctttccagagtcatttgaaa
gcctctgaacacgcttctgatatccacatggtgtcctttgactatcatcaaatggttaaa
ggaggaaaggcagaaaaattacacagtgttctcaaaccacaagtccagaagtttctagat
tatggatttttttatttcgatggcagtgaagttcaaaggtgccagagtggtacagttcga
acaaactgcttggattgtctggatagaacaaatagtgtgcaggcattcctcggcttagag
atgctagccaaacagctggaagctctgggcttggctgaaaaacctcagttggtgactcgc
tttcaagaagttttccggtccatgtggtctgtgaatggcgattcgatcagcaaaatctac
gcaggcactggagcccttgaagggaaggccaaggctggaaagttaaaagatggtgcacga
tctgtcaccagaaccattcagaataatttcttcgacagctccaagcaagaagccattgat
gttttgcttctgggaaatactctaaacagcgatttagctgacaaagcccgagcacttcta
actactggaagtttgcgtgtttctgaacagacattacagtcagcatcttccaaagtctta
aagaacatgtgtgagaacttctacaaatactcaaagcccaagaagatccgcgtgtgtgtt
gggacctggaatgtgaatggcgggaagcagttccgcagcatagcattcaagaaccagacg
ctcactgactggcttctggatgctcccaagttagctggcatccaggagtttcaagataag
agaagtaagccgactgatatttttgcaattggctttgaagaaatggtggagctgaatgct
gggaacattgtgaatgcaagcacaacaaaccagaagctgtgggcagtggaactgcagaag
accatctccagagacaacaagtatgttctgctggcttcagagcagttggtgggtgtctgc
ctgtttgtctttatcagaccacagcatgctccctttatcagggatgttgcagttgatact
gtgaaaactgggatggggggtgcaactggaaacaagggtgctgttgcaattcggatgctt
ttccacaccaccagcctttgctttgtctgcagccactttgctgcagggcagtcccaagtc
aaagagagaaatgaagattttgtagaaatagcacgaaaactgagttttcccatgggaaga
atgctcttctcccatgactatgtattttggtgtggtgatttcaactatcgaattgatctt
cctaatgaagaagttaaagagctcataagacagcaaaactgggattctcttatagctgga
gatcaactcatcaatcagaaaaatgcaggacagatctttagaggatttttagagggaaaa
gtaacatttgctccaacctataaatatgacttgttttccgaagactatgacaccagtgag
aagtgccgtacccctgcttggacagaccgtgtcctttggagaaggaggaagtggcctttt
gacagatcagctgaagatttagatcttctgaatgctagtttccaagatgaaagtaaaatc
ctttatacatggactcctggcaccttgctgcactatgggagagccgagctgaagacttct
gaccacaggcctgtcgttgccctgattgatatagatatatttgaagttgaagctgaagag
agacaaaaaatttataaagaagttattgcagtccagggcccaccagatggcacagtgatg
gtctcaatcagaagttcggcacaagaaaataccttttttgatgacgctttgattgatgag
cttctgcagcagtttgcacacttcggtgaagttatactcataagatttgtagaagataaa
atgtgggttacatttttggagggaagctccgccttgaatgttctgagcctaaatggtaaa
gagttattaaatcggactataacgattactttaaaaagtccagattggatcaaaaatttg
gaagaagagatgagtttagagaaaatcagtgtcacgttgccctcgtcaacaagctccacc
ctgcttggtgaagatgcagaggttgcagcagactttgacatggaaggtgatgttgatgac
tatagtgctgaggtagaggagcttcttcctcagcatcttcagccatcctcaagctctggc
cttggcacttctccaagctcttcaccccgcaccagtccctgccagtcacccacagtacca
gagtactccgcgcctgctcttcctgtcagacctagtcgagcaccatcaagaactccagga
cctctgagttcacaggtctctccagttgacactcagccagcagcccagaaggattcttcc
cagtccatagaacccaagaggccaccccctccccgaccagttgctcctccagcacgtcct
gccccaccacagagaccacctccaccttcaggggctaggagtcctgcgcctgctagaaga
gaatttggaggtgttggagcccctcccagtcccggggttgctaggagagagatggaagca
cccaaaagcccaggaacagcacggaaagataatatagggcgtaatcaaccttcccctcaa
gcaggacttgcaggcccaggacctgctggatatggtgcagcgagaccgacagttccagct
cgtgctggagtgatcagtgcccctcagagccaggctcgggcatctgctggaaggctgact
cctgaaggccaaagcaagccctcagagccatcgaaaggtcctgctgttcttccagaacca
ctgaagcctcaggctgcatttcctctgcagccttctctgcccactcctgctcaaaagtta
caagacccgcttgtccccatagcagcacctatgcctccctccggctcccaaccaaatttg
gaaactccaccacagcccccacctcggagcaggtcgtctcaaagcttgccttcagactcc
tcaccacagctgcaagtaaaaacaaatggagtttctggtgtcaaacaagaaccaacattg
aagagtgacccatttgaagatctctcacttagtgtgcttgctgtatcaaaggctcagcct
tctgttcagatttcatctgttctaaccccagacccaaagatgttgattcagttgccttct
gcatcgcaaagtaaacttaactctttgagttccataagttgcatgccatccatgcctcca
gttccagagcaaagcaagtcacaggaaagtatggggagttctgcaaacccatttcccagc
ctgccccgcaggaacccttttacagacaggactgctgcccctggaaacccatttagagtt
cagtctcaagaatcagaggcaacttcttggctagtcaaagaagagcctgctcctaacagt
cctttccctcctctcatgcctctcagtcacgacacaagcaagccttcaagttcacttgat
ggttttgaggataattttgatctgcaaaggcagtctacagtaaaaacaagcaaccccaaa
ggatgggtaacctttgacgaagatgatgactttcctactacagggaagtcaaagtcagtt
tatccagaattactggataatgtgccagcttcatttgatgatgactggagtaaaggtaca
agcgtttccttctgtgtgttgccagccagaaggccaccaccaccaccacctcctcctgtc
cctctgctaccacctggcacaacctcatctgcaggacctagcacagccctgccatctaag
gcatcttccacattagacttcacagaaagataa
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