KEGG   Arvicanthis niloticus (African grass rat): 117718305
Entry
117718305         CDS       T08817                                 
Symbol
Chaf1b
Name
(RefSeq) chromatin assembly factor 1 subunit B isoform X1
  KO
K10751  chromatin assembly factor 1 subunit B
Organism
anu  Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:anu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:anu03036]
    117718305 (Chaf1b)
Chromosome and associated proteins [BR:anu03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     117718305 (Chaf1b)
SSDB
Motif
Pfam: Beta-prop_CAF1B_HIR1 CAF-1_p60_C WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I WDR55 Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_SPT8 B-prop_COPA_B_2nd NBCH_WD40 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_SCAP eIF2A Beta-prop_TEP1_C Beta-prop_EML Beta-prop_HPS5 Beta-prop_ELP1_1st WD_LRWD1 KNTC1_N Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 117718305
NCBI-ProteinID: XP_034371786
LinkDB
Position
12:75294067..75312140
AA seq 578 aa
MKVITCEIAWHNKEPVYSLDFQHGAAWRIHRLASAGVDTAVRIWKVEKGPDGKAIVEFLS
NLARHTKAVNVVRFSPTGEILASGGDDAVILLWKMNDSKEPEQTAFQDEDEAQLNKENWT
VVKTLRGHLEDVYDICWATDGNLMASASVDNTVIIWDASKGQKLSIFNEHKSYVQGVTWD
PLGQYIATLSCDRVLRVYSTQKKRVAFNISKMLSGQGPEGEARSFRMFHDDSMKSFFRRL
SFTPDGSLLLTPAGCMESGENVTNTTYVFSRKHLKRPIAHLPCPGKATLAVRCCPVYFEL
RPVAETEKASEEPSPELVSLPYRMVFAVASEDSILLYDTQQSFPFGYVSNIHYHTLSDIS
WSSDGTFLAVSSTDGYCSFVTFEKGELGVPLKEKPVLSIRTPDTAKKTKNQTQQGSSPGS
RSVEGTPSNRIQDPSSPCTTPSPTTQSPALSAIKDSPSAIPAGKSSLPRPSEEKTLQPSS
QNIKAPQPRRITLNTLQTWGKTVPRRINLTPLKADTVPNPLPSSGTAPSTEEVQSGKGGV
GEIPGEPQDEPPELKRPRLEEHEGDTQILAPDETSKSA
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgaaagtgatcacgtgtgaaatcgcctggcacaacaaggagccagtgtatagcctggac
ttccagcatggggcagcctggaggatccacaggctggcatccgcgggggtggacaccgcg
gttaggatctggaaggtggagaaggggccagatgggaaagccattgtggaattcctctcc
aatcttgctcggcacaccaaggctgtcaatgttgtgcgcttttctccaactggggagatt
ttagcatctggaggagatgatgctgtcattctcttgtggaagatgaatgacagcaaggag
ccggagcagaccgcctttcaggatgaggacgaggctcagctgaataaggagaactggact
gtggtaaagactctgaggggccacttagaagatgtgtatgatatttgctgggcaacagat
gggaatttgatggcttctgcctctgtggacaacacggttatcatatgggatgccagtaaa
ggacagaagctttccattttcaacgagcataaaagttatgtgcaaggggtgacctgggat
cctttgggtcaatatattgcgaccctgagttgtgacagggtgctgcgggtctatagcacc
cagaagaagcgtgtggctttcaacatttcaaagatgctctctggacaagggcctgaagga
gaggcaagaagtttccggatgtttcacgatgacagcatgaagtcgttcttccgaagactc
agttttactcctgatggatctttgctcctcacgccagccggatgtatggagtctggtgag
aatgtgacaaacaccacctacgtgttctccagaaaacacctgaaaaggccgattgcccac
cttccgtgccctggaaaagccacgcttgctgtccgctgctgtcctgtctactttgaattg
aggccggtggcggaaacagagaaagcatcagaggagcccagccccgagctggtgagcctg
ccctaccgtatggtgtttgcagtagcctccgaggactctatattgctgtatgacacgcaa
cagtctttcccatttggctatgtgtctaacatccattaccacaccctgagtgacatttcc
tggtccagcgatgggaccttcttggctgtttcctccacggacggttactgctcatttgtg
acctttgagaaaggagaacttggcgtacctttgaaagagaagccagttttgagcataaga
actcctgacacagcgaagaaaaccaagaaccagacacagcagggatcttcgccaggatcc
agatcagtcgaaggaactcccagcaacagaatccaagaccccagcagtccctgtaccacc
ccctcaccaaccacacagtctccagctctgtctgccatcaaagacagtccctccgctatc
ccggctggcaaaagctccttgccaaggccttctgaggagaagaccctgcagccttctagt
caaaacataaaagccccacaaccccgcaggatcactctgaacacgctgcagacttggggc
aagacagtcccccggagaataaatttaacaccattgaaggcagacactgtgccaaatcca
ctgcccagtagtgggaccgccccctccacagaagaggtccagtctggtaagggaggggtt
ggagagattcctggagagccccaagatgagcctcctgaacttaaaagacccaggctcgag
gaacatgaaggagatacccaaatccttgcccctgatgagacttccaagtctgcctga

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