Arvicanthis niloticus (African grass rat): 117718309
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Entry
117718309 CDS
T08817
Symbol
Top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03440
Homologous recombination
anu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117718309 (Top3b)
03460 Fanconi anemia pathway
117718309 (Top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anu03032
]
117718309 (Top3b)
03400 DNA repair and recombination proteins [BR:
anu03400
]
117718309 (Top3b)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
117718309 (Top3b)
DNA replication proteins [BR:
anu03032
]
Eukaryotic type
DNA Topoisomerases
117718309 (Top3b)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
117718309 (Top3b)
FA (Fanconi anemia) pathway
117718309 (Top3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
117718309
NCBI-ProteinID:
XP_034371794
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All DBs
Position
12:2624569..2649347
Genome browser
AA seq
862 aa
AA seq
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MKTVLMVAEKPSLAQSIAKILSRGNMSSHKGLNGACSVHKYTGTFAGQPVHFKMTSVCGH
VMTLDFLGKYNKWDKVDPAELFSQAPTEKKEANPKLNMVKFLQVEGRGCDYVVLWLDCDK
EGENICFEVLDAVLPVMNNAHNGEKIVFRARFSSITDTDICNAMTRLSEPDHNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGDLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQAKVHTDKEESLLLDWDRVRVFDREIAQMFLNMTKLEKEAWVEATSRKEKAKQRPLA
LNTVEMLRVASSALGMGPQHAMQIAERLYTQGYISYPRTETTHYPENFDLKGSLRQQANH
PYWADSVKQLLAEGINRPRKGHDAGDHPPITPMKSATEAELGGDAWRLYEYITRHFIATV
SHDCKYLQSTISFRIGPEHFTCMGKTVISPGFTEIMPWQSVPLEESLPTCQKGDTFTVSE
VKMLEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVESGRRLKPTNL
GIVLVHGYYKIDAELVLPTIRSAVEKQLNLIAQGKADYHQVLGHTLDIFKRKFHYFVDSI
AGMDELMEVSFSPLAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYTLPQNGTIKL
YKELRCPLDDFELVLWSSGSRGKSYPLCPYCYNHPPFRDMKKGMGCNECTHPTCQHSLSM
LGIGQCVECESGVLVLDPTSGPKWKVACNTCNVVAHCFENAHRVRVSADTCNTCEAALLD
VDFNKAKSPLPGNETQHTGCIFCDPVFQELVELKHAASCHPMHRGGPGRRQGRGRARARR
PPGKPNPRRPKDKMSALAAYFV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagactgtgctcatggtagcagaaaagccatccctggcacagtctattgccaaaatc
ctctcccgaggaaacatgtcctcacacaaagggctgaatggggcatgttcagtgcacaag
tacacaggaacctttgctggccaacctgtccacttcaagatgacatctgtctgtggtcat
gtgatgacactagattttctgggaaagtacaacaagtgggataaggtggaccctgcagag
ctcttcagccaagctccgacagagaaaaaggaagcaaaccccaagctgaacatggtcaag
ttcctgcaggtggagggcagaggctgtgactatgtcgtgctgtggctggactgtgacaag
gaaggcgagaatatttgctttgaggtccttgatgccgttcttcctgtcatgaataatgcc
cacaatggtgagaagatagtgttccgggccaggttcagttccatcactgacacagacatc
tgcaatgccatgacccgcctgagtgagccagaccacaatgaggcactctcggtggatgcc
cgccaggagctagacctgcgcatcggctgtgcgttcaccaggtttcaaacaaagtatttc
cagggaaaatacggtgatttagacagctctctcatctcctttgggccgtgtcagactcct
accctgggattctgtgtagaaagacatgataaaatccagtccttcaaaccagagacctac
tgggtacttcaggccaaggttcatactgataaagaggagtcactccttctggactgggac
cgtgttagagtttttgaccgggagattgcgcagatgtttttaaacatgacaaagctagaa
aaagaagcttgggtggaggctacaagcaggaaagaaaaggccaagcagagaccacttgct
ctgaacactgtggagatgctgcgtgtggccagctcagctctgggtatgggaccacagcac
gccatgcaaatagctgagagattatacacacagggatacatcagctacccacggacagaa
accacccactatcccgagaactttgacctgaagggctcgttgcgacagcaggccaatcac
ccatactgggcagactcggtaaagcagttgttagcggaaggcatcaaccgccctcggaaa
ggtcatgatgctggtgaccatcctccgatcacacctatgaagtcagctacagaggctgaa
ttaggaggtgatgcatggcgactctacgagtacatcaccagacacttcattgccacagtg
agccatgactgcaagtatctccagagcactatctccttcaggatcgggcctgaacatttt
acatgcatgggaaagacagttatttccccaggcttcacagagatcatgccttggcagagc
gtgcccctggaagagagtctgcccacatgccagaagggtgataccttcactgtgagtgaa
gtgaagatgctcgagaagcagacgagcccaccagactatctgactgaggctgagctcatc
actctcatggagaagcatggtatcgggactgatgccagtatccctgtacacatcaacaat
atctgccagcgcaactatgtcactgtggagagtggccgccggctcaagcccaccaacctt
ggcatagttctggtgcatggttactacaagattgatgcagagctggtactgcccaccatc
cgcagcgcagtggagaagcagttgaacctgattgcccagggcaaagctgactaccaccag
gtcctgggccacaccctggatatcttcaagaggaaatttcactactttgtggattctatt
gctggcatggacgagttgatggaagtatccttttcacccttggctgccactggcaagccc
ctttcacgctgtggaaagtgccatcgatttatgaagtatatccaggccaagccaagccgc
ctgcactgctcccactgtgatgagacctacaccctcccccagaacggtaccatcaagctc
tacaaggagctgcggtgcccattggatgactttgaactggtcctgtggtcctcgggctcc
cggggcaagagctacccactttgtccctactgctataaccatccacccttccgagacatg
aagaaaggcatgggctgcaatgagtgcacacaccccacttgccagcactcactgagtatg
ctgggcattggccaatgcgtggaatgcgagagtggagtcctggttctagaccctacctct
ggtcccaagtggaaggtggcctgcaatacatgcaatgtggtggcacactgcttcgaaaat
gcccaccgagtacgggtatctgccgacacctgcaacacctgcgaggccgccttgctcgat
gtagacttcaacaaggccaagtctccccttcctggcaatgagacacagcacacaggctgc
atcttctgtgaccccgtcttccaggagctggtggagctgaagcatgcagcctcctgccat
cccatgcaccgaggtggtcctggaaggaggcagggtcgtgggcgggcccgggcccggaga
cctccaggaaagcccaaccccaggcggccaaaagacaagatgtcagccctggctgcttac
tttgtatga
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