Arvicanthis niloticus (African grass rat): 117718400
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Entry
117718400 CDS
T08817
Symbol
Dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
anu03009
]
117718400 (Dcaf13)
04121 Ubiquitin system [BR:
anu04121
]
117718400 (Dcaf13)
Ribosome biogenesis [BR:
anu03009
]
Eukaryotic type
90S particles
Other 90S particles
117718400 (Dcaf13)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
117718400 (Dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_IFT140_1st
eIF2A
MIOS_WD40
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
117718400
NCBI-ProteinID:
XP_034371818
LinkDB
All DBs
Position
13:18077780..18104602
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AA seq
445 aa
AA seq
DB search
MKVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPKSLATVLSGACDGEVKIWNLTKRQCIRTIQAHEGFVRGICTRFC
GTSFFTVGDDKTVKQWKMDGPGYGEEEEPLYTVLGKTVYTGIDHHWKDPVFATCGQQVDI
WDEQRTSPVCSMNWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFNFTAANEDYNLYTFDMRALDTPVMVHLDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKL
GVLTSREKAANDYNQKLKEKFQYHPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEMN
RRKHSKPGSVPIVSERKKHVVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaaatgctgagccggaaccctgacaactatgtccgcgaaaccaaactggat
atacaaagagttccaaggaactatgatcctactttacatccttttgaagtcccacgagaa
tatgtaagagctttaaatgctaccaagttagaacgagtgttcgcaaaaccatttcttgct
tccctggatggccaccgtgatggagtcaattgcctggcaaagcatccaaagagcctggct
actgtcctgtctggggcatgtgatggagaggttaaaatttggaacctgactaaacgacaa
tgcatccgaacgatacaagcacatgaaggttttgtacgaggaatatgcactcgcttttgt
gggacttctttttttactgttggagatgacaaaactgtgaagcagtggaaaatggatgga
ccaggctacggagaggaggaggagccattgtacaccgtgttaggaaagacagtgtatact
ggcattgatcatcactggaaagacccagtctttgccacttgtggacaacaagtagacatt
tgggatgaacaaagaaccagccctgtgtgctcgatgaactggggatttgacagtataagt
agtgttaaatttaatcctattgagacatttctcttgggaagttgtgcttctgataggaac
atagtactgtatgatatgcgtcaagctactcctttgaaaaaggttatcctggatatgaga
acaaatacaatctgttggaaccctatggaagctttcaattttactgcagcaaatgaagat
tataacttatatacttttgatatgcgtgcactggacactcctgttatggtccacttggat
cacgtgtctgcagtacttgatgtagattactctccgactgggaaggaatttgtgtctgct
agttttgataagtctattagaatcttccctgtggacaaaagccgaagcagggaagtgtat
catacaaagcgaatgcaacatgttatttgtgtgaaatggacttctgacagcaagtacatc
atgtgtgggtctgatgaaatgaatatccggctgtggaaagctaatgcatctgaaaaactg
ggtgtgcttacatcacgagaaaaagcagcaaatgattataaccagaagttaaaggaaaaa
tttcaataccatccgcatataaaacggattgctcgacaccgacatctaccaaaatctatc
tacagccagattcaggagcagcgcattatgaaggaagctcgtcgccgaaaggaaatgaat
cgtcgaaaacatagcaagcctggatctgtgccaattgtgtcagagaggaagaaacatgta
gtggcggttgtgaaataa
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