KEGG   Arvicanthis niloticus (African grass rat): 117718445
Entry
117718445         CDS       T08817                                 
Symbol
Pdgfb
Name
(RefSeq) platelet-derived growth factor subunit B
  KO
K17386  platelet-derived growth factor subunit B
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu01521  EGFR tyrosine kinase inhibitor resistance
anu04010  MAPK signaling pathway
anu04014  Ras signaling pathway
anu04015  Rap1 signaling pathway
anu04020  Calcium signaling pathway
anu04072  Phospholipase D signaling pathway
anu04151  PI3K-Akt signaling pathway
anu04510  Focal adhesion
anu04540  Gap junction
anu04630  JAK-STAT signaling pathway
anu04810  Regulation of actin cytoskeleton
anu05167  Kaposi sarcoma-associated herpesvirus infection
anu05200  Pathways in cancer
anu05206  MicroRNAs in cancer
anu05211  Renal cell carcinoma
anu05214  Glioma
anu05215  Prostate cancer
anu05218  Melanoma
anu05231  Choline metabolism in cancer
anu05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:anu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    117718445 (Pdgfb)
   04014 Ras signaling pathway
    117718445 (Pdgfb)
   04015 Rap1 signaling pathway
    117718445 (Pdgfb)
   04630 JAK-STAT signaling pathway
    117718445 (Pdgfb)
   04020 Calcium signaling pathway
    117718445 (Pdgfb)
   04072 Phospholipase D signaling pathway
    117718445 (Pdgfb)
   04151 PI3K-Akt signaling pathway
    117718445 (Pdgfb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    117718445 (Pdgfb)
   04540 Gap junction
    117718445 (Pdgfb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    117718445 (Pdgfb)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    117718445 (Pdgfb)
   05206 MicroRNAs in cancer
    117718445 (Pdgfb)
   05231 Choline metabolism in cancer
    117718445 (Pdgfb)
  09162 Cancer: specific types
   05214 Glioma
    117718445 (Pdgfb)
   05218 Melanoma
    117718445 (Pdgfb)
   05211 Renal cell carcinoma
    117718445 (Pdgfb)
   05215 Prostate cancer
    117718445 (Pdgfb)
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    117718445 (Pdgfb)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    117718445 (Pdgfb)
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    117718445 (Pdgfb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:anu04052]
    117718445 (Pdgfb)
   00536 Glycosaminoglycan binding proteins [BR:anu00536]
    117718445 (Pdgfb)
Cytokines and neuropeptides [BR:anu04052]
 Cytokines
  Growth factors (RTK binding)
   117718445 (Pdgfb)
Glycosaminoglycan binding proteins [BR:anu00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   117718445 (Pdgfb)
SSDB
Motif
Pfam: PDGF PDGF_N
Other DBs
NCBI-GeneID: 117718445
NCBI-ProteinID: XP_034371896
LinkDB
Position
13:complement(55034498..55053502)
AA seq 241 aa
MNRCWALFLPLCCYLRLVSAEGDPIPEELYEMLSDHSIRSFDDLQRLLHRASVDEDGAEL
DLNMTRAHSGVESESSSRGRRSLGSLAAAEPAVIAECKTRTEVFQISRNLIDRTNANFLV
WPPCVEVQRCSGCCNNRNVQCRASQVQMRPVQVRKIEIVRKKPIFKKATVTLEDHLACKC
ETVVTPRPVTRSPGTSREQRARTPPARVTIRKVRIRRPPKGKHRKFKHTHDKAALKETLG
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atgaatcgctgctgggcgctcttcctgcctctctgctgctacctgcgtctggtcagcgcc
gagggggatcccattcctgaggaactctatgaaatgctgagtgaccactccatccgctcc
tttgatgaccttcagcgcctgctgcacagagcctccgtagatgaagatggggctgagctg
gacttgaacatgacccgagcacactctggagtcgagtcagagagctcatctcgagggagg
aggagcctaggttcactggcagcagcagagcctgccgtaatcgccgagtgcaagacgcgc
acagaggtgttccagatctcgcggaacctcatcgatcgcaccaacgccaacttcctggtg
tggccgccctgcgtggaggtgcagcgctgctccggctgctgcaacaaccgcaatgtgcag
tgccgggcctcccaggtgcagatgcggccggtgcaggtgagaaagattgagattgtgcga
aagaagccaatcttcaagaaggccacagtgaccctggaggaccacctggcctgcaagtgt
gagacagtagtgacccctcggcccgtgactcgaagtcctggcacatccagggagcagcga
gccaggacgcctccagctcgagtgaccattcggaaggtgcggatccgccggccccccaaa
gggaagcaccgaaagtttaagcacacccacgacaaggcggcactgaaggagaccctcgga
gcctag

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