Arvicanthis niloticus (African grass rat): 117718474
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Entry
117718474 CDS
T08817
Symbol
Phf20l1
Name
(RefSeq) PHD finger protein 20-like protein 1 isoform X1
KO
K18402
PHD finger protein 20
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117718474 (Phf20l1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
117718474 (Phf20l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD20L1_u1
PHD_5
Tudor_2
Tudor_3
MBT
PHD
DUF4537
SH3_Hsr9
Tudor_4
Motif
Other DBs
NCBI-GeneID:
117718474
NCBI-ProteinID:
XP_034371936
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All DBs
Position
13:42435868..42506688
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AA seq
1020 aa
AA seq
DB search
MSKKPPNRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYW
DSNRLRPLERPALRKEGLKDEEELFDFKAGEEVLARWTDCRYYPAKIEAINKEGTFTVQF
YDGVIRCLKRMHIKAMPEDAKGQFLFQVKSQHPLSWCCPIDPAGSCNQSMGSEDWIALVK
AAAAAAAKNKTGTKPRTSANSNKEKERDGGKWFKVPSKKAETSTCIVTAELEKKEELPTS
SEPFVGLHIDSVPKIVFPQPESTLTNKRKNNQGNSFQAKRARLNKITGLLASKAVGVDGA
EKREDCSATAPVLEQAISPKPQSQKKNEAVISSSANTQKPALLSSTLSSGKARSKKCKHE
SGESSGCIKTPKSPLAPELIQAKDLTLVSQLSSVINKTSSPQPVNPPRPCKHSERRRRSQ
RLATLPMPDDSLEKLSSSSSATDGKVFSIGSQNQQESSIPEVPAIAYVPLQKLGPCLPLD
LSCGSEVTGSQTPESSYPGGECTRELKEETPLLANPASKVVSDIKGAAAATGISKTEKKV
KLEEKTSTAFGKRKEKDKERKEKRDKDHYKPKQKKKKKKKKKSKQHDYSDYEDSSLDFLE
RCSSPLTRSSGSSLAPRSTFTEKTTASQYPRAILSVDLSGENLSDVEFLDDSSTESLLLS
GDEYNQDFDSTNFEESQDEDDALNEIVRCICELDEENGFMIQCEECLCWQHSVCMGLLED
SIPEQYICYICRDPPGQRWSAKYRYDKEWLNNGKMYGLSFLKENYSHLNAKKIVSTHHLL
ADVYGVTEVLHGLQLKIGILKNKHHPDLRLWAYSGKGKDQDQVVAGAEKKVTLQDTAISE
GKKYVQNHKEPPLKMEETYITSEHSYQKPQSFSQDCQSLTDPGSSDDDDASSFEEDGELH
VPDKSHLLYSVNDRGVSEKNPASGNKVFVYNDKKGTEGPGDSHLQWQLNLLTHIENVQNE
VTSRMDLIEKEVDVLESWLDFTGELEPPDPLARLPQLKRHIKQLLLDVGKVQQIATLCSV
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaagcccccaaatcgtcctggaatcacttttgagattggtgctcgtttggag
gcactggactacttacagaaatggtatccatcacgaattgaaaaaattgattatgaagaa
gggaagatgctagtccattttgagcgctggagtcatcgttatgatgagtggatttactgg
gacagcaataggttgcgaccccttgaacgacctgcactaagaaaagaaggactaaaggat
gaggaagagctctttgattttaaagctggagaagaagttctggctcgatggacagactgt
cgctattaccctgccaagattgaagcaattaacaaagaaggaacgttcacagttcagttt
tatgatggcgtaattcgttgtttaaaaagaatgcacattaaagccatgcctgaggatgct
aaggggcagtttctgttccaggtgaaatcccagcatccactaagctggtgttgtcctatc
gacccagctggatcgtgtaaccagtctatgggaagtgaggactggattgctttagtcaaa
gcagctgctgcagctgcagcgaaaaacaaaacagggactaaaccccgaaccagtgctaac
agcaataaagagaaagagagagatgggggaaaatggttcaaagtaccttcaaagaaggca
gagacctccacgtgcatagtcacagcagagcttgagaagaaggaagagctacccacatct
agcgaaccatttgtaggacttcacatagacagcgttccaaagatcgtctttccacagcca
gagagcacattaacaaacaagaggaaaaataatcaaggcaactcatttcaggcaaagaga
gctcgacttaacaagattactggtctgttggcatccaaagctgttggggtagatggtgct
gaaaaaagagaagactgcagtgcaacagctccagtcctggagcaggcgatttcacctaaa
cctcaaagtcagaaaaaaaatgaagctgtcattagcagttctgccaacactcagaaacct
gcactgttatcctcaactttgtcttcagggaaggctcgcagcaagaaatgcaaacatgaa
tctggagagtcttctgggtgtataaaaacccctaagtcaccacttgccccagaattaata
caagccaaggatttgacgcttgtatctcagctttcttcagtgataaataaaactagttct
ccacagcctgtgaatccccctagaccttgcaagcatagtgagagaagaagaagatctcag
cggttagccaccttacccatgcctgatgattctctagaaaagctttcttcttcctcttca
gcaactgatggcaaagtattctccatcggttctcagaatcagcaagagtcttcaatacca
gaggtgcctgctattgcatatgtgccactccagaagctaggaccctgcctccctcttgat
ttaagttgtggttcagaagtcacaggaagtcaaactccagaatcatcatatcctggtggt
gaatgtaccagggaattaaaggaggagacaccattgttagcaaatcccgcctccaaagta
gtgagtgatataaaaggagctgcagcagccacaggaatatcgaaaacagaaaaaaaagtg
aaattggaagaaaaaacctccactgcatttggtaaaaggaaagaaaaggataaggagaga
aaagagaagcgagacaaagatcactacaaaccaaagcagaagaaaaagaagaagaagaaa
aagaaatctaaacagcatgactattcggactatgaagacagttccctggactttttggaa
aggtgttcttctccactaactagatcttctggaagttctctggctccacgaagcacattt
acagagaaaactacagcttctcagtacccgagggcaattctgtctgttgatcttagtggt
gaaaacttgtcagatgtggaattcctggatgactcttccacagagagcctgcttctgagt
ggggatgaatacaaccaagactttgattcaactaattttgaggagtctcaggatgaagat
gatgctcttaatgagattgtacggtgtatctgtgaactggatgaggagaatggcttcatg
atccagtgtgaagagtgcctatgctggcagcacagtgtgtgcatggggctcctggaggac
agcattccggagcagtacatctgctacatctgtcgggaccctccgggtcagagatggagt
gcaaaatatcgttatgataaggaatggttgaataatggaaaaatgtatgggttatctttt
ttaaaagaaaattattctcatctcaatgccaaaaaaatagtttccacacatcatcttctt
gctgatgtctatggtgtaacagaagtactgcatggattacagcttaagattggaatacta
aagaataaacatcatcctgaccttcgtctctgggcttattctgggaaggggaaagaccaa
gatcaggtagtagctggagcagagaaaaaagtaacacttcaggacacagctatctcagag
ggaaagaaatatgtgcagaaccacaaggaaccacccctgaaaatggaagaaacgtacata
acaagcgaacacagctatcaaaagccgcaaagctttagtcaggactgccagtctctcact
gaccctggaagctcagatgatgatgatgctagcagttttgaagaagatggggaactccat
gtgccagataaaagccatcttctgtactcagtaaacgatcgtggagtgtcagagaagaat
ccagcttcagggaataaagtatttgtttataatgataaaaagggcacggagggcccagga
gactcgcatcttcagtggcagctaaatcttctcacacatatagaaaatgtgcagaatgaa
gtcaccagcaggatggacctcatagaaaaagaagtggacgttctggaaagttggcttgat
ttcacaggggagttggagccaccagatccccttgcaagactgccccaacttaaacgccac
ataaaacaactcttacttgatgtgggcaaagtacaacaaattgcaactctttgctctgta
taa
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