Arvicanthis niloticus (African grass rat): 117718540
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Entry
117718540 CDS
T08817
Symbol
Tcf20
Name
(RefSeq) transcription factor 20 isoform X1
KO
K24769
transcription factor 20
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117718540 (Tcf20)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117718540 (Tcf20)
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
117718540
NCBI-ProteinID:
XP_034372128
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All DBs
Position
13:complement(57594701..57766408)
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AA seq
1986 aa
AA seq
DB search
MQSFREQSSYHGNQQSYPQEVHSSSRIEEFSPRQAQMFQNFAGAGGGSSGTGSNSSGRRG
TAAAAAAMASETSGHQGYQGFRKEAGDFYYMAGNKDTVAAGTPQPPQRRPSGPVQSYGPP
QGSSFGNQYASEGHVSQFQAQHSALGGVSHYQQDYTGPFSPGSAQYQQQASSQQQQQQQQ
QQQQQQQQQQQQQQQQVQQLRQQLYQSHQPLPQATGQPASGSSHLQPMQRPSTLPSSAGY
QLRVGQFGQHYQSSASSSSSSSFPSPQRFSQSGQSYDGSYSVNAGSQYEGHNVGSNAQAY
GTQSNYSYQPQSMKNFEQAKIPPGTQQGQQQQQQQPQPQQQQQQQQQQQHPPQHVMQYTN
AATKLPLQSQVGQYSQPEVPVRSPMQFHQNFSPISNPSPAASVVQSPSCSSTPSPLMQSG
ENLQCGQGNVPMSSRNRILQLMPQLSPTPSMMPSPNSHAAGFKGFGVEGVPEKRLTDPGL
SSLSALSTQVANLPNTVQHMLLSDALTPQKKTSKRPSSSSKKADSCTNSEGSSQPEEQLK
SPMAESLDGGCSSSSEDQGERVRQLSGQSTSSDTTYKCGASEKAGSSPTQGAQNEAPRLS
TSPATREEAASPGAKDTSLSSEGNTKVNEKTVGVIVSREAMTGRVEKSGGQDKGSQEDDP
AASQRPPSNSGIKDISHTSLPQPDPLGGGNKGNKSGDNNSSNHNGEGNGQSSHSAVGPSF
TGRTEPSKSPGSLRYSYKESFGSAVPRNVSSFPQYPSGQEKGDFGSHGERKGRNEKFPSL
LQEVLQGYHHHPDRRYPRSAQEHQGIASGLEGTARPNILVSQTNELASRGLLNKSIGSLL
ENPHWGPWERKSGSTAPEMKQINLSDYPIPRKFEIEPPSSAHEPGGSLSERRSVICDISP
LRQIVRDPGAHSLGHMGADARIGRNERLNPSLSQSVILPGGLVSMETKLKSQSGQIKEED
FEQSKSQASFNKKSGDHCHPTSIKHETYRGNASPGAAAHDSISDYGPQDSRSTPMRRVPG
RVGSRETLRGRSSSQYHEFAEKLKMSPGRSRGPGGDPHHMNPHMTFSERANRSSLHAPFS
PNSESLASAYHTNTRAHAYGDPNTGLNSQLHYKRQMYQQQQEEYKDWASSSAQGVIAAAQ
HRQEGPRKSPRQQQFLDRVRSPLKNDKDGMMYGPPVGTYHDPSTQEAGRCLMSSDGLPAK
SMELKHSSQKLQESCWDLSRQTSPAKSSGPPGMSNQKRYGPPHEPDGHGLAESAQSSKPS
NVMLRLPGQEDHSSHNPLIMRRRVRSFISPIPSKRQSQDVKNSNTDDKGRLLHPSKEGAD
KAYNSYSHLSHSQDIKSVPKRDASKDLPNPDNRNCPAVTLTSPAKTKILPPRKGRGLKLE
AIVQKITSPNIRRSASANSAEAGGDTVTLDDILSLKSGPPEGGTVATQEAEMEKRKGEVV
SDLVSATNQESNVEKPLPGPSEEWCGSGDDKVKTEAHVETASTGKEPSGTMTSTASQKPG
GNQGRPDGSLSGAAPLIFPESKNVAPVGILAPEANPKPEEKENDAVMISPKQESFPPKGY
FPSGKKKGRPIGSVNKQKKQQQQPPPPPQPPQMPEGSADGEPKPKKQRQRRERRKPGAQP
RKRKTKQAVPIVEPQEPEIKLKYATQPLDKTDAKNKSFFPYIHVVNKCELGAVCTIINAE
EEEQTKLVRSRKGQRSLTPPPSSTESKVLPASSFMLQGPVVTESSVMGHLVCCLCGKWAS
YRNMGDLFGPFYPQDYAATLPKNPPPKRSTEMQSKVKVRHKSASNGSKTDTEEEEEQQQQ
KEQRSLAAHPRFKRRHRSEDCGGGPRSLSRGLPCKKAAAEGNSEKTVSDTKPSAPTTSEG
GPELELQIPELPLDSNEFWVHEGCILWANGIYLVCGRLYGLQEALEIAREMKCSHCQEAG
ATLGCYNKGCSFRYHYPCAIDADCLLHEENFSVRCPKHKPPLPCPLPPLQNKTAKGSLST
EQSERG
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgtttcgggagcaaagcagttaccacggaaaccagcagagctacccacaggag
gtgcacagctcatcccgtatagaagagttcagccctcgtcaggcccagatgttccagaat
tttgcgggagcaggtggtggtagtagtggcactggcagcaacagtagcgggcggcgagga
acagctgctgcagcggcagcaatggctagcgagacctctggccatcaaggctatcagggt
ttcaggaaagaagctggagatttttactacatggcaggcaacaaagacaccgtggcagca
ggaaccccacagcctcctcagcgaaggccttctgggcctgtgcagagctatggacctccc
caggggagcagttttggcaatcagtatgcgagtgagggtcatgtgagccaatttcaagca
cagcactctgcccttggtggtgtgtctcattatcagcaggattacacagggcctttctct
cctgggagtgctcagtatcaacagcaggcctctagccaacaacaacaacagcagcagcaa
cagcagcagcagcagcaacagcagcagcaacagcaacagcagcagcaagtacagcagttg
agacaacagctttaccaatctcatcagcctctgccacaagctactggacaaccagcctct
ggctcatcccatctacagccaatgcaacggccctcaactctgccatcttctgctggttat
cagttaagagtgggtcagtttggccagcactaccagtcttctgcttcttcttcttcttct
tcctcctttccttcaccacagcgtttcagtcagtctggacaaagctatgatggcagttac
agtgtgaatgccggatctcagtatgaagggcataatgtgggctctaatgcacaggcttat
ggaacacaatcaaattacagctatcaacctcagtcaatgaaaaattttgaacaagctaag
attccaccaggaacccaacaggggcagcagcagcaacagcagcaaccacaacctcagcaa
cagcagcagcaacagcagcaacaacagcatcccccccagcatgtgatgcagtacacaaat
gctgccaccaagctgcctctgcaaagccaggtggggcagtacagccagcctgaggttcct
gtaaggtcccctatgcagtttcaccagaacttcagcccgatctctaacccttctccagct
gcttctgtggttcagtctccaagctgtagctctaccccttctcctctcatgcagagtggt
gagaatctccagtgtgggcaaggcaatgtgcccatgagttccagaaaccgaattttacag
ctaatgccccaactcagtccaactccatcgatgatgcccagtcctaattctcatgctgca
ggattcaaagggtttggagtagaaggggtgccggaaaagcggctgactgatcctgggttg
agtagtttgagtgctctgagtacgcaagtggccaatcttcctaatactgtccagcacatg
ttactttctgatgccttgacacctcagaagaagacttctaagaggccctcatcatcatct
aagaaagcagatagctgtacaaactcagaaggctcctcacagcctgaagaacaactaaag
tcccctatggcagagtcattggatggaggttgctctagtagttcagaagatcaaggtgag
agagtgaggcaactaagtggccagagcactagctctgacaccacctataagtgtggagct
tcagagaaagctggctcctcaccaacacaaggtgctcagaatgaggcccctaggctcagt
accagtcctgcaactagggaagaagctgcctctccaggtgctaaggacacatcactgtca
tctgaggggaacacaaaagtcaatgagaagacagttggggtgattgtctcccgagaagcc
atgacaggtcgggtagaaaaatctggtggacaagataaaggctcccaggaggacgatcct
gctgccagtcagagaccacctagcaatagtggtataaaggatatcagccacacatcactt
ccacagccagatcctctaggaggagggaacaaaggaaacaagagtggtgataataatagc
tctaaccacaatggagagggaaatggccagagtagccactctgcagtaggcccaagtttc
acaggcaggactgagcctagcaagtctcctggaagtttgcgctatagttacaaagagagt
tttgggtcagctgtaccacgaaatgtcagtagttttcctcagtatccttcaggacaagaa
aagggggattttggcagccatggggagcgaaagggtagaaatgagaagttcccaagtctc
ctacaggaagtgcttcagggctaccaccaccatcctgacagaaggtatcctagaagcgct
caggagcatcaagggatagctagtggcctggaaggaactgcaaggcccaacatcttagtc
agtcaaaccaatgaattagccagcaggggccttctgaacaagagtattggatccctgttg
gaaaatccccactggggaccatgggaaaggaagtcaggcagcacagctcctgaaatgaaa
cagatcaatttgtctgactatcccattcccagaaagtttgagatagaacctccatcatca
gcccatgagcctgggggctccctttctgaaagaagatcagtaatctgtgatatatcccca
ctaagacagatcgtcagggacccaggggctcactcattgggacacatgggtgctgatgcc
agaattgggaggaatgaacgtctcaacccaagtttaagtcagtcagtcattcttcctggt
gggttggtgtccatggaaacaaaattgaaatcccagagtgggcagataaaagaggaagac
tttgaacaatccaaatctcaagctagtttcaacaagaaatctggagaccactgtcatcct
accagcatcaagcatgagacttaccgtggcaatgctagtcctggagcagcagctcatgat
tccatttcagactatggcccacaagatagcaggtccacaccaatgcggcgggtccctggt
agagttggtagccgggagacactgaggggtcggtcctcttcgcagtaccatgaatttgca
gaaaaattgaagatgtctccaggcaggagcaggggcccagggggagaccctcatcacatg
aacccacatatgaccttttcagagagggccaataggagttctttacatgctcctttttcc
cccaactcagaaagcctggcctctgcttaccacacaaacaccagggctcatgcttatggg
gaccctaatactggtttgaattcccagctccattataagagacagatgtaccaacagcaa
caagaggagtataaagattgggccagcagctctgctcagggagtgattgctgctgcacaa
cataggcaggaagggccacggaagagcccacggcagcagcagtttcttgacagagtacgg
agccccctgaaaaacgacaaagatggtatgatgtatggcccaccagtaggtacataccat
gatccaagcactcaggaagctgggcgctgtctcatgtctagtgatggtctgcctgccaaa
agcatggaattgaagcacagctctcagaagttacaagagtcttgttgggatctttctcgg
cagacttctccagccaaaagcagtggtcctccaggaatgtctaatcaaaaacggtatggg
ccaccccatgagccagatggacatggactagccgagtctgcacagtcatccaaacctagt
aatgtaatgttacggcttcctggtcaagaggatcattcttctcacaatcccttaatcatg
cggaggcgtgttcgttcttttatctcccctattcccagtaagagacagtcacaagatgta
aaaaacagtaacactgatgataaagggcgcctcctccacccatcaaaagaaggtgccgat
aaagcatacaattcctacagccatctttctcacagtcaggatatcaagtctgtccctaag
agagatgcttccaaggaccttccaaacccagacaatagaaactgtcctgctgttaccctg
acaagccctgctaagaccaaaatactgcccccacggaagggacggggattaaaattggaa
gctatagttcagaagatcacatccccaaatattaggaggagtgcatctgcaaacagtgct
gaggctgggggagacacagtcacactggatgatatactatctctaaagagtggtcctcct
gaaggtgggactgtggctactcaagaggctgagatggaaaagcgaaagggtgaggtggta
tctgacttagtcagtgcaacaaaccaggaatcaaatgttgaaaagcctcttccagggcct
tctgaagagtggtgtggcagtggggatgacaaagtcaagacagaggcacatgtagaaaca
gcttctactggaaaggaaccctctggtactatgacatccacagcttcacagaagcctggt
ggtaaccaagggagaccagatggttccctgagtggagcagcaccactaatctttcctgag
tcaaagaatgtagctccagtgggcatattggcccctgaggcaaaccccaagcctgaagag
aaagagaatgatgcagtcatgatttcacccaaacaagaaagtttccccccaaaagggtat
ttcccatcgggaaagaaaaaggggagaccaattggtagtgtgaataagcaaaagaaacag
cagcagcaaccacctccacctcctcagccccctcagatgccagaaggttctgcagatgga
gagccaaagccaaaaaagcagaggcaaaggagggagagaaggaagcctggggcccagcca
aggaagcggaaaaccaaacaagcagttcccattgtagaacctcaagaaccagagatcaag
ctaaagtatgctacccagccgctagataaaaccgatgccaagaacaagtcttttttccct
tacatccatgtagtaaataagtgtgaacttggagctgtttgtacaatcataaatgctgaa
gaagaagaacagaccaaattggtgaggagccggaagggtcagaggtctctgacccctccc
cccagcagcacagaaagcaaggtgctcccagcttcatcctttatgttgcaggggcctgtg
gtaacagaatcttctgttatggggcacctggtttgctgtctctgtggcaagtgggccagt
taccgtaacatgggtgacctctttggaccattttatccccaagattatgcagccactctt
ccgaagaatccacctcctaagaggtccacagaaatgcagagcaaagtcaaggttcggcac
aaaagcgcttctaatggttctaaaactgacactgaggaggaggaggagcagcagcagcag
aaggagcagaggagcctggctgctcatcctaggttcaagcggcgccaccgctcagaagac
tgtggtggaggtcctcggtccctgtccagggggctcccttgtaaaaaagcagccgctgag
ggcaacagtgaaaagactgtctcagacacaaagccctccgcacctaccacttcagaaggt
ggtcctgagctggagttacaaatccctgaactacctcttgacagcaacgaattttgggtc
catgagggttgtattctctgggccaatggaatctacctggtctgtggcaggctctacggc
ctgcaggaagcgctggaaatcgccagagagatgaaatgctcccactgccaggaggctggc
gctactttgggctgctacaacaaaggctgctccttccgataccattacccatgtgccatt
gacgcagattgtttgctgcatgaggagaatttctcggtgaggtgccccaagcacaagcct
ccccttccatgccctctcccgcccttgcagaacaagaccgcaaaaggcagcctcagcaca
gagcagtcggagcgggggtga
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integrated database retrieval system
