Arvicanthis niloticus (African grass rat): 117718555
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Entry
117718555 CDS
T08817
Symbol
Itgb7
Name
(RefSeq) integrin beta-7
KO
K06590
integrin beta 7
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04151
PI3K-Akt signaling pathway
anu04510
Focal adhesion
anu04512
ECM-receptor interaction
anu04514
Cell adhesion molecules
anu04672
Intestinal immune network for IgA production
anu04810
Regulation of actin cytoskeleton
anu04820
Cytoskeleton in muscle cells
anu05165
Human papillomavirus infection
anu05202
Transcriptional misregulation in cancer
anu05410
Hypertrophic cardiomyopathy
anu05412
Arrhythmogenic right ventricular cardiomyopathy
anu05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117718555 (Itgb7)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117718555 (Itgb7)
04514 Cell adhesion molecules
117718555 (Itgb7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117718555 (Itgb7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117718555 (Itgb7)
04810 Regulation of actin cytoskeleton
117718555 (Itgb7)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117718555 (Itgb7)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
117718555 (Itgb7)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117718555 (Itgb7)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
117718555 (Itgb7)
05412 Arrhythmogenic right ventricular cardiomyopathy
117718555 (Itgb7)
05414 Dilated cardiomyopathy
117718555 (Itgb7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117718555 (Itgb7)
04515 Cell adhesion molecules [BR:
anu04515
]
117718555 (Itgb7)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117718555 (Itgb7)
Cell adhesion molecules [BR:
anu04515
]
Integrins
Integrin beta subunits
117718555 (Itgb7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
PSI_integrin
EGF_2
I-EGF_1
EGF_integrin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
117718555
NCBI-ProteinID:
XP_034372160
LinkDB
All DBs
Position
13:complement(76470504..76485950)
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AA seq
806 aa
AA seq
DB search
MVDSSTVLIFLLVLGGGQSELDTKITSSGEAAEWEDPDLSLQGSCQPAPSCQKCILSHPS
CAWCKQLNFIASGEAEARRCARREELLARGCPAEELEEPRGRQEVLQDRPLSQGDRGEGA
TQLAPQRIRVTLRPGEPQKFRARFLRAAGYPVDLYYLMDLSYSMKDDLEHVRQLGHALLV
RLQEVTHSVRIGFGSFVDKTVLPFVSTVPSRLRHPCPSRLERCQPPFSFHHVLSLTGDAQ
AFEREVGRQNVSGNLDSPEGGFDAILQAALCQEQIGWRNVSRLLVFTSDDTFHTAGDGKL
GGIFMPSDGQCHLDSNGVYTNSAEFDYPSVGQIAQALTAANIQPIFAVTGATLPVYQELS
QLIPKSAVGELTEDSSNVVQLIMEAYDNLSSTVNLEHSSLPPGVSISFESHCGGPEKREG
EAGDRGQCNHVRVNQTVDFWVTLQATHCLPEARVLRLWALGFSEELIVELHTLCDCNCSD
AQPQAPYCSDGQGDLQCGICSCAPGRLGQLCECSEADLSSPDLESGCRAPNGTGPLCSGK
GRCQCGRCSCSGQSSGRLCECDDASCERHEGILCGGFGHCQCGVCHCHANHTGRACECSE
SVDSCVSPEGGLCSGHGDCKCNRCQCMDGYYGALCDQCLGCKSPCEQYRDCAECGAFRTG
PLAANCSVACAAVNVTLALNPNLDDAWCKERTMDNQLFFFLVEHVVGGVILRVRPQEKGA
DHTRTIVLGCIGGIVAVGLGLVLAYRLSVEIYDRREYSRFEKERQQLNWKQDSNPLYKSA
VTTTVNPRFQGTKGCSPSLSLTREAD
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggtggattcatcaactgttcttatttttctgctggttctcggcggaggtcagagtgaa
ttagataccaagattacatcctcgggggaggccgcagaatgggaggatcctgacctgtct
ctgcagggatcctgccagccagctccttcctgccagaagtgcatactctcacaccccagc
tgtgcatggtgcaagcaattgaacttcattgcctcgggagaggcagaggcgaggcgctgt
gcgcggcgagaggagctactggcccgcgggtgccccgcagaggagctggaggagccgaga
ggccgccaggaggtgctgcaggacaggccactcagccagggagaccgcggcgagggggcc
acccagttggccccgcagcggatccgcgtcacgctgcgaccaggggagccccagaaattt
cgggcccgcttcctccgagctgcggggtacccggtggacctgtactaccttatggacctg
agctactcaatgaaggacgacttggaacatgtgcgccagctcgggcacgccctgctggtc
aggctgcaggaggtcacccactctgtgcgcataggttttggctccttcgtggacaaaacg
gtgctgcccttcgtaagcacagtgccctccaggcttcgccacccgtgccccagccggctg
gagcgttgtcagcctcctttcagctttcatcacgtgttatccctcacgggggacgctcaa
gccttcgagagagaggtgggacgccagaatgtctctggcaacctggactcgcctgaaggc
ggctttgatgccattttgcaggccgccctctgccaggagcagattggctggagaaatgtg
tcccgacttctggtgttcacttcagatgatacattccacacagcgggggatgggaaactg
ggtggcattttcatgcccagcgacgggcagtgccatctggacagcaatggtgtctacact
aacagcgcagagtttgactatccctccgtgggtcaaatagcccaggccctcactgcggca
aacatccaacctatctttgccgtcaccggtgcaacactgcctgtgtatcaggagctgagc
cagctgattcccaagtctgctgtcggggagctcactgaggactccagcaatgtggtacag
ctcatcatggaagcttatgataacctgtcatccaccgtgaatctggaacactcttcgctc
ccacctggagtcagcatctcttttgagtctcactgtgggggtcctgagaagagggagggt
gaagctggggaccggggacaatgcaatcatgtccgagtcaaccagacggtggatttctgg
gttactcttcaagccactcactgcctcccagaagcccgtgtcctacggctctgggccctt
ggcttctcagaggagttaattgtggagctgcacacactgtgtgactgtaattgtagtgac
gcccagcctcaagctccctactgcagtgatggacagggggaccttcaatgcggaatatgc
agctgtgcccctggccgccttggtcagctgtgtgaatgctctgaggctgacctgtcctcc
ccagatttggaatctggctgccgggccccaaatgggacagggcccctatgcagcgggaag
ggtcgatgccaatgtggacgctgcagctgcagtggacagagctctgggcgtctgtgcgag
tgtgatgatgccagttgtgagcgacacgagggcatcctctgtggaggctttggccactgc
cagtgtggagtgtgtcactgtcatgccaaccacactggcagagcatgtgagtgcagtgag
agtgtggacagctgtgtcagtcctgaaggagggctctgcagtgggcacggagactgcaaa
tgcaaccgttgccagtgcatggatggctactacggggctctgtgtgaccagtgcctaggc
tgcaagtcaccatgtgagcaatacagggactgtgcggagtgcggggcatttcgtacgggt
cccctggcagccaactgcagcgtggcctgtgctgccgtgaatgtgaccttggccttgaac
cctaacttggatgatgcctggtgcaaagagaggacgatggacaaccagctgttctttttc
ctggtggagcatgtggtcggaggagtcatactgagagtgagacctcaagagaagggagcg
gatcatacccgtaccattgtactgggctgcatagggggcattgtggcagtgggactcggg
ctggtcctggcttaccggctctctgtggaaatctacgaccgccgcgagtacagtcgcttt
gagaaggagaggcagcaactcaactggaagcaggacagcaatcctctctacaaaagtgca
gtcacaaccactgtcaacccccgcttccaagggaccaaaggctgctcgccgtccctctct
ctgacccgggaagcagactga
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